RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 EFNA5P52803 228 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 NUCB2P80303 420 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 ZP2Q05996 745 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
XRCC1-206ENST00000597811 SMAD2Q15796 467 aaKnown RBP16.99■□□□□ 0.31
XRCC1-206ENST00000597811 DUSP6Q16828 381 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 NOMO2Q5JPE7 1267 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 CDCA2Q69YH5 1023 aaPredicted RBP16.99■□□□□ 0.31
XRCC1-206ENST00000597811 PDE12Q6L8Q7 609 aaKnown RBP16.99■□□□□ 0.31
XRCC1-206ENST00000597811 MRPL10Q7Z7H8 261 aaKnown RBP16.99■□□□□ 0.31
XRCC1-206ENST00000597811 TMEM173Q86WV6 379 aaPredicted RBP16.99■□□□□ 0.31
XRCC1-206ENST00000597811 VN1R2Q8NFZ6 395 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 RSPH1Q8WYR4 309 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 APOL6Q9BWW8 343 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 ENTPD7Q9NQZ7 604 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 BLOC1S4Q9NUP1 217 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 FAM13BQ9NYF5 915 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 KCNG1Q9UIX4 513 aa16.99■□□□□ 0.31
XRCC1-206ENST00000597811 SLC16A4O15374 487 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 B4GALT3O60512 393 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 PLS3P13797 630 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 SSTR3P32745 418 aaPredicted RBP16.98■□□□□ 0.31
XRCC1-206ENST00000597811 ALDH7A1P49419 539 aaKnown RBP16.98■□□□□ 0.31
XRCC1-206ENST00000597811 AFF1P51825 1210 aaKnown RBP16.98■□□□□ 0.31
XRCC1-206ENST00000597811 KRT17Q04695 432 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 AMHR2Q16671 573 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 DYMQ7RTS9 669 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 HACE1Q8IYU2 909 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 MYCT1Q8N699 235 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 CCDC51Q96ER9 411 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 PRIMPOLQ96LW4 560 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 REEP2Q9BRK0 252 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 ADPGKQ9BRR6 497 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 EIF2AQ9BY44 585 aaKnown RBP16.98■□□□□ 0.31
XRCC1-206ENST00000597811 NRDE2Q9H7Z3 1164 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 C17orf75Q9HAS0 396 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 LARSQ9P2J5 1176 aaKnown RBP16.98■□□□□ 0.31
XRCC1-206ENST00000597811 DNAJB4Q9UDY4 337 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 PRKAG3Q9UGI9 489 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 ODF2LQ9ULJ1 636 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 PCDHA7Q9UN72 937 aa16.98■□□□□ 0.31
XRCC1-206ENST00000597811 RBM19Q9Y4C8 960 aaKnown RBP16.98■□□□□ 0.31
XRCC1-206ENST00000597811 N4BP3O15049 544 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 NPTXRO95502 500 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 ITGA4P13612 1032 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 RNASELQ05823 741 aaKnown RBP16.97■□□□□ 0.31
XRCC1-206ENST00000597811 STRN3Q13033 797 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 COASYQ13057 564 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 MAPK7Q13164 816 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 ARSHQ5FYA8 562 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 TMC7Q7Z402 723 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 ZNF280BQ86YH2 543 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 ADHFE1Q8IWW8 467 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 DAW1Q8N136 415 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 SMRP1Q8NCR6 262 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 SMG8Q8ND04 991 aaKnown RBP16.97■□□□□ 0.31
XRCC1-206ENST00000597811 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 URGCPQ8TCY9 931 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 LRRC15Q8TF66 581 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 DHX58Q96C10 678 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 TMEM169Q96HH4 297 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 CDCA3Q99618 268 aaPredicted RBP16.97■□□□□ 0.31
XRCC1-206ENST00000597811 GBP3Q9H0R5 595 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 FZD8Q9H461 694 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 RSAD1Q9HA92 442 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 NGRNQ9NPE2 291 aaKnown RBP16.97■□□□□ 0.31
XRCC1-206ENST00000597811 RCOR1Q9UKL0 485 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 USP20Q9Y2K6 914 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 MYH11P35749 1972 aa16.97■□□□□ 0.31
XRCC1-206ENST00000597811 MYH15Q9Y2K3 1946 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 ACKR2O00590 384 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 GALTP07902 379 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 KCNC3Q14003 757 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 GIT2Q14161 759 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 SHC4Q6S5L8 630 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 PPP4R3CPQ6ZMV5 832 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 BCL7CQ8WUZ0 217 aaPredicted RBP16.96■□□□□ 0.31
XRCC1-206ENST00000597811 LEO1Q8WVC0 666 aaPredicted RBP16.96■□□□□ 0.31
XRCC1-206ENST00000597811 C1QTNF1Q9BXJ1 281 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 PARVGQ9HBI0 331 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 PARP2Q9UGN5 583 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 IPPQ9Y573 584 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 TRIP11Q15643 1979 aa16.96■□□□□ 0.31
XRCC1-206ENST00000597811 PHLPP2Q6ZVD8 1323 aa16.96■□□□□ 0.3
XRCC1-206ENST00000597811 CNTNAP2Q9UHC6 1331 aa16.96■□□□□ 0.3
XRCC1-206ENST00000597811 A0A087X0B3 334 aa16.95■□□□□ 0.3
XRCC1-206ENST00000597811 H0YCG3 227 aa16.95■□□□□ 0.3
XRCC1-206ENST00000597811 DDHD2O94830 711 aa16.95■□□□□ 0.3
XRCC1-206ENST00000597811 IDEP14735 1019 aa16.95■□□□□ 0.3
XRCC1-206ENST00000597811 MATR3P43243 847 aaKnown RBP eCLIP16.95■□□□□ 0.3
XRCC1-206ENST00000597811 SLC11A1P49279 550 aa16.95■□□□□ 0.3
XRCC1-206ENST00000597811 SMC1AQ14683 1233 aaKnown RBP16.95■□□□□ 0.3
XRCC1-206ENST00000597811 FAM187BQ17R55 369 aa16.95■□□□□ 0.3
XRCC1-206ENST00000597811 ATF7IP2Q5U623 682 aa16.95■□□□□ 0.3
XRCC1-206ENST00000597811 APBB1IPQ7Z5R6 666 aaPredicted RBP16.95■□□□□ 0.3
XRCC1-206ENST00000597811 IQUBQ8NA54 791 aa16.95■□□□□ 0.3
XRCC1-206ENST00000597811 DDX12PQ92771 950 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms