RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 MIOSQ9NXC5 875 aa18.39■□□□□ 0.53
SSBP4-204ENST00000597724 THEGQ9P2T0 379 aa18.39■□□□□ 0.53
SSBP4-204ENST00000597724 DNAJB4Q9UDY4 337 aa18.39■□□□□ 0.53
SSBP4-204ENST00000597724 PCDHA7Q9UN72 937 aa18.39■□□□□ 0.53
SSBP4-204ENST00000597724 COG5Q9UP83 839 aa18.39■□□□□ 0.53
SSBP4-204ENST00000597724 BRWD1Q9NSI6 2320 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 H0YCG3 227 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 FAM13AO94988 1023 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 CSPG5O95196 566 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 STAT6P42226 847 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 ME1P48163 572 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 SCNN1GP51170 649 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 ERVFC1P60507 584 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 KRT17Q04695 432 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 DCAF4L1Q3SXM0 396 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 HAUS6Q7Z4H7 955 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 PDILTQ8N807 584 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 GSTCDQ8NEC7 633 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 ATXN2LQ8WWM7 1075 aaKnown RBP18.38■□□□□ 0.53
SSBP4-204ENST00000597724 HLA-CQ95604 372 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 TLR9Q9NR96 1032 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 SNTG2Q9NY99 539 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 PARP2Q9UGN5 583 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 PUF60Q9UHX1 559 aaKnown RBP18.38■□□□□ 0.53
SSBP4-204ENST00000597724 ZMYM2Q9UBW7 1377 aa18.38■□□□□ 0.53
SSBP4-204ENST00000597724 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.37■□□□□ 0.53
SSBP4-204ENST00000597724 MYMKA6NI61 221 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 TRAK2O60296 914 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 TBCAO75347 108 aaKnown RBP18.37■□□□□ 0.53
SSBP4-204ENST00000597724 SCP2P22307 547 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 SLC11A1P49279 550 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 STRN3Q13033 797 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 DYMQ7RTS9 669 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 DDX12PQ92771 950 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 FAM193BQ96PV7 902 aaPredicted RBP18.37■□□□□ 0.53
SSBP4-204ENST00000597724 FIZ1Q96SL8 496 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 TMEM175Q9BSA9 504 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 ZHX3Q9H4I2 956 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 KLK14Q9P0G3 267 aa18.37■□□□□ 0.53
SSBP4-204ENST00000597724 ALDH2P05091 517 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 PROZP22891 400 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 DSC1Q08554 894 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 HYAL1Q12794 435 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 COL19A1Q14993 1142 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 E2F4Q16254 413 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 PDE12Q6L8Q7 609 aaKnown RBP18.36■□□□□ 0.53
SSBP4-204ENST00000597724 APBB1IPQ7Z5R6 666 aaPredicted RBP18.36■□□□□ 0.53
SSBP4-204ENST00000597724 TMEM173Q86WV6 379 aaPredicted RBP18.36■□□□□ 0.53
SSBP4-204ENST00000597724 COLGALT2Q8IYK4 626 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 MICAL1Q8TDZ2 1067 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 DNAJC19Q96DA6 116 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 TMEM169Q96HH4 297 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 IGSF21Q96ID5 467 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 CDT1Q9H211 546 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
SSBP4-204ENST00000597724 TDRD15B5MCY1 1934 aaKnown RBP18.35■□□□□ 0.53
SSBP4-204ENST00000597724 ABLIM1O14639 778 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 NRP1O14786 923 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 FSCN2O14926 492 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 RECQL4O94761 1208 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 KRT85P78386 507 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 MRPS5P82675 430 aaKnown RBP18.35■□□□□ 0.53
SSBP4-204ENST00000597724 TFF2Q03403 129 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 ZNF568Q3ZCX4 644 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 MPZL3Q6UWV2 235 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 ZPBP2Q6X784 338 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 FAM178BQ8IXR5 827 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 BCL7CQ8WUZ0 217 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-204ENST00000597724 PABPC5Q96DU9 382 aaKnown RBP18.35■□□□□ 0.53
SSBP4-204ENST00000597724 CHAMP1Q96JM3 812 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 ZBTB45Q96K62 511 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-204ENST00000597724 TCHPQ9BT92 498 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 CUEDC2Q9H467 287 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 UBE2ZQ9H832 354 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-204ENST00000597724 FAN1Q9Y2M0 1017 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
SSBP4-204ENST00000597724 VCANP13611 3396 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 K7ENM7 598 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 NCK2O43639 380 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 TOM1L1O75674 476 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 MCF2P10911 925 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 NMT1P30419 496 aaKnown RBP18.34■□□□□ 0.53
SSBP4-204ENST00000597724 GTF2BQ00403 316 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 GRIK3Q13003 919 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 RESP18Q5W5W9 173 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 ADGRD2Q7Z7M1 963 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 ZBTB33Q86T24 672 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 DDX53Q86TM3 631 aaKnown RBP18.34■□□□□ 0.53
SSBP4-204ENST00000597724 CEP120Q8N960 986 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 IQUBQ8NA54 791 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 LEO1Q8WVC0 666 aaPredicted RBP18.34■□□□□ 0.53
SSBP4-204ENST00000597724 PPP2R3CQ969Q6 453 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 ASB2Q96Q27 587 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 RPS6KC1Q96S38 1066 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 TCF25Q9BQ70 676 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 CXCL16Q9H2A7 254 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 ST6GALNAC4Q9H4F1 302 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
SSBP4-204ENST00000597724 TBX20Q9UMR3 447 aa18.34■□□□□ 0.53
SSBP4-204ENST00000597724 GDAQ9Y2T3 454 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms