RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 HTR4Q13639 388 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 RILPL1Q5EBL4 403 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 SWSAP1Q6NVH7 229 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 CCDC73Q6ZRK6 1079 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 TRMT1LQ7Z2T5 733 aaKnown RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 CKAP2LQ8IYA6 745 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 BBXQ8WY36 941 aaPredicted RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 SMG7Q92540 1137 aaKnown RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 NELL1Q92832 810 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 ZNF668Q96K58 619 aaPredicted RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 RHOBTB2Q9BYZ6 727 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 MRPL17Q9NRX2 175 aaKnown RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 DNAJB4Q9UDY4 337 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 GMEB2Q9UKD1 530 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 MTF2Q9Y483 593 aaPredicted RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 NUMBLQ9Y6R0 609 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 SLC30A4O14863 429 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 TBC1D4O60343 1298 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 RFPL2O75678 378 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 CCDC192P0DO97 292 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 FGFR4P22455 802 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 SMARCA1P28370 1054 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 ME1P48163 572 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 SLC11A1P49279 550 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 GPC5P78333 572 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 SPEM2Q0P670 501 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 LONRF3Q496Y0 759 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 AXDND1Q5T1B0 1012 aaPredicted RBP14.27□□□□□ -0.13
SCAF1-202ENST00000595242 EFCAB12Q6NXP0 572 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 ELMSAN1Q6PJG2 1045 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 FMR1NBQ8N0W7 255 aaPredicted RBP14.27□□□□□ -0.13
SCAF1-202ENST00000595242 SRBD1Q8N5C6 995 aaKnown RBP14.27□□□□□ -0.13
SCAF1-202ENST00000595242 NETO1Q8TDF5 533 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 RSPH1Q8WYR4 309 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 ANP32BQ92688 251 aaKnown RBP14.27□□□□□ -0.13
SCAF1-202ENST00000595242 LPPQ93052 612 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 MAP7D2Q96T17 732 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 GBP3Q9H0R5 595 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 TNMDQ9H2S6 317 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 STK39Q9UEW8 545 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 DPP7Q9UHL4 492 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 INPP5FQ9Y2H2 1132 aa14.27□□□□□ -0.13
SCAF1-202ENST00000595242 ZZEF1O43149 2961 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 FAM170BA6NMN3 283 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 BTBD18B2RXH4 712 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 C2CD2LO14523 706 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 MAGEB2O15479 319 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 PHKA2P46019 1235 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 GNL2Q13823 731 aaKnown RBP14.26□□□□□ -0.13
SCAF1-202ENST00000595242 UBXN2BQ14CS0 331 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 ACAP1Q15027 740 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 SF3A1Q15459 793 aaKnown RBP14.26□□□□□ -0.13
SCAF1-202ENST00000595242 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
SCAF1-202ENST00000595242 CEP55Q53EZ4 464 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 NOMO2Q5JPE7 1267 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 MIS18BP1Q6P0N0 1132 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 TSSK4Q6SA08 328 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 GLB1LQ6UWU2 654 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 GET4Q7L5D6 327 aaPredicted RBP14.26□□□□□ -0.13
SCAF1-202ENST00000595242 CMTR1Q8N1G2 835 aaKnown RBP14.26□□□□□ -0.13
SCAF1-202ENST00000595242 ZNF710Q8N1W2 664 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 FSIP1Q8NA03 581 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 TNFRSF25Q93038 417 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 LZTS2Q9BRK4 669 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 RPP25Q9BUL9 199 aaKnown RBP14.26□□□□□ -0.13
SCAF1-202ENST00000595242 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
SCAF1-202ENST00000595242 PIDD1Q9HB75 910 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 SH3GLB2Q9NR46 395 aa14.26□□□□□ -0.13
SCAF1-202ENST00000595242 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.26□□□□□ -0.13
SCAF1-202ENST00000595242 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.25□□□□□ -0.13
SCAF1-202ENST00000595242 ADH1AP07327 375 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 HOXB3P14651 431 aaPredicted RBP14.25□□□□□ -0.13
SCAF1-202ENST00000595242 DARSP14868 501 aaKnown RBP14.25□□□□□ -0.13
SCAF1-202ENST00000595242 CMA1P23946 247 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 TMOD1P28289 359 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 GPC3P51654 580 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 NPY5RQ15761 445 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 ZNF280BQ86YH2 543 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 LRRC71Q8N4P6 559 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 ZNF707Q96C28 371 aaPredicted RBP14.25□□□□□ -0.13
SCAF1-202ENST00000595242 OSBPL6Q9BZF3 934 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 CHST12Q9NRB3 414 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 ANGPTL2Q9UKU9 493 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 KCNJ14Q9UNX9 436 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 CEP131Q9UPN4 1083 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 MAFBQ9Y5Q3 323 aaPredicted RBP14.25□□□□□ -0.13
SCAF1-202ENST00000595242 V9GY48 417 aaPredicted RBP14.25□□□□□ -0.13
SCAF1-202ENST00000595242 SPEGQ15772 3267 aa14.25□□□□□ -0.13
SCAF1-202ENST00000595242 ZFYVE26Q68DK2 2539 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 CEP295Q9C0D2 2601 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 GREB1Q4ZG55 1949 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 MEIS3P2A8K0S8 358 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 MEIS1O00470 390 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 TEX28O15482 410 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 B4GALT3O60512 393 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 CUTAO60888 179 aa14.24□□□□□ -0.13
SCAF1-202ENST00000595242 CSDE1O75534 798 aaKnown RBP14.24□□□□□ -0.13
SCAF1-202ENST00000595242 OFD1O75665 1012 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms