RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 KSR1Q8IVT5 923 aa14.21□□□□□ -0.13
VRK3-209ENST00000594948 EPS8L1Q8TE68 723 aa14.21□□□□□ -0.13
VRK3-209ENST00000594948 N4BP2L2Q92802 583 aaPredicted RBP14.21□□□□□ -0.13
VRK3-209ENST00000594948 MOV10L1Q9BXT6 1211 aaKnown RBP14.21□□□□□ -0.13
VRK3-209ENST00000594948 PRR12Q9ULL5 1215 aa14.21□□□□□ -0.13
VRK3-209ENST00000594948 ARHGEF35A5YM69 484 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 DDTLA6NHG4 134 aaPredicted RBP14.2□□□□□ -0.14
VRK3-209ENST00000594948 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 NQO1P15559 274 aaKnown RBP14.2□□□□□ -0.14
VRK3-209ENST00000594948 SNAP25P60880 206 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 PPARDQ03181 441 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 IKQ13123 557 aaPredicted RBP14.2□□□□□ -0.14
VRK3-209ENST00000594948 CRYMQ14894 314 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 RNF207Q6ZRF8 634 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 ZNF564Q8TBZ8 553 aaPredicted RBP14.2□□□□□ -0.14
VRK3-209ENST00000594948 ACCSQ96QU6 501 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 PCDHB18PQ96TA0 734 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 TEKT3Q9BXF9 490 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 CDC42EP4Q9H3Q1 356 aaKnown RBP14.2□□□□□ -0.14
VRK3-209ENST00000594948 ST6GALNAC4Q9H4F1 302 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 FAM198AQ9UFP1 575 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 ATRNL1Q5VV63 1379 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 SMIM23A6NLE4 172 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 TMEM110-MUSTN1A8MSY1 372 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 ANKRD63C9JTQ0 380 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 SPOPO43791 374 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 HIP1RO75146 1068 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 GJB6O95452 261 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 SLC8A3P57103 927 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 NCALDP61601 193 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 PPP3CAQ08209 521 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 PTK6Q13882 451 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 RRP1BQ14684 758 aaKnown RBP14.2□□□□□ -0.14
VRK3-209ENST00000594948 C1orf220Q5T0J3 134 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 SH3BP5LQ7L8J4 393 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 DAW1Q8N136 415 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 GRK7Q8WTQ7 553 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 CKAP2Q8WWK9 683 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 PSPC1Q8WXF1 523 aaKnown RBP14.2□□□□□ -0.14
VRK3-209ENST00000594948 SHC3Q92529 594 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 RIT2Q99578 217 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 LARSQ9P2J5 1176 aaKnown RBP14.2□□□□□ -0.14
VRK3-209ENST00000594948 BAIAP2L1Q9UHR4 511 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 LGALS13Q9UHV8 139 aa14.2□□□□□ -0.14
VRK3-209ENST00000594948 K7ENM7 598 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 VIL1P09327 827 aaKnown RBP14.19□□□□□ -0.14
VRK3-209ENST00000594948 POLR2MP0CAP2 368 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 SKIV2L2P42285 1042 aaKnown RBP14.19□□□□□ -0.14
VRK3-209ENST00000594948 MFAP3P55082 362 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 BNIP1Q12981 228 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 RASA3Q14644 834 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 CEP55Q53EZ4 464 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 NOP9Q86U38 636 aaKnown RBP14.19□□□□□ -0.14
VRK3-209ENST00000594948 XXYLT1Q8NBI6 393 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 C7orf43Q8WVR3 580 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 ARHGEF2Q92974 986 aaKnown RBP14.19□□□□□ -0.14
VRK3-209ENST00000594948 IFT74Q96LB3 600 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 TIPINQ9BVW5 301 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 NUP85Q9BW27 656 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 UNC45AQ9H3U1 944 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 AAASQ9NRG9 546 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 ABCF3Q9NUQ8 709 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 DBR1Q9UK59 544 aaKnown RBP14.19□□□□□ -0.14
VRK3-209ENST00000594948 ARL2BPQ9Y2Y0 163 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 ACTL7BQ9Y614 415 aa14.19□□□□□ -0.14
VRK3-209ENST00000594948 POLRMTO00411 1230 aaKnown RBP14.18□□□□□ -0.14
VRK3-209ENST00000594948 CHMP2AO43633 222 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 UBOX5O94941 541 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 SGPL1O95470 568 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 MXI1P50539 228 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 DLG4P78352 724 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 FMO1Q01740 532 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 CCDC15Q0P6D6 951 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 SHROOM1Q2M3G4 852 aaPredicted RBP14.18□□□□□ -0.14
VRK3-209ENST00000594948 UBAP2Q5T6F2 1119 aaKnown RBP14.18□□□□□ -0.14
VRK3-209ENST00000594948 VSTM1Q6UX27 236 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 MAB21L3Q8N8X9 362 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 BANK1Q8NDB2 785 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 SLC17A8Q8NDX2 589 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 DYDC1Q8WWB3 177 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 GRAMD1AQ96CP6 724 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 SNF8Q96H20 258 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 IWS1Q96ST2 819 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 LXNQ9BS40 222 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 MTFR1LQ9H019 292 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 BATF3Q9NR55 127 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 WRAP73Q9P2S5 460 aaPredicted RBP14.18□□□□□ -0.14
VRK3-209ENST00000594948 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.18□□□□□ -0.14
VRK3-209ENST00000594948 LTBP4Q8N2S1 1624 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 TCRBV7S2A1N4TA0A589 114 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 TMEM120BA0PK00 339 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 FAM196BA6NMK8 535 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 ZBTB39O15060 712 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 SORBS3O60504 671 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 TTC4O95801 387 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 SLURP2P0DP57 97 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 SLCO1A2P46721 670 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 IFNAR2P48551 515 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 STAT2P52630 851 aa14.18□□□□□ -0.14
VRK3-209ENST00000594948 COPS2P61201 443 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms