RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 EDEM3Q9BZQ6 932 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 KDM4CQ9H3R0 1056 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 TXNRD2Q9NNW7 524 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 FBXO40Q9UH90 709 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 WDR81Q562E7 1941 aa16.59■□□□□ 0.25
PNKP-204ENST00000594661 PPFIA2O75334 1257 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 AKAP3O75969 853 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 ANP32DO95626 131 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 LINGO3P0C6S8 592 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 EIF4A3P38919 411 aaKnown RBP16.58■□□□□ 0.25
PNKP-204ENST00000594661 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.25
PNKP-204ENST00000594661 ALDH5A1P51649 535 aaPredicted RBP16.58■□□□□ 0.25
PNKP-204ENST00000594661 NPEPPSP55786 919 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 ROR2Q01974 943 aaKnown RBP16.58■□□□□ 0.25
PNKP-204ENST00000594661 SP2Q02086 613 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 GNPTABQ3T906 1256 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 PDXDC1Q6P996 788 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 CDHR1Q96JP9 859 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 ZNF570Q96NI8 536 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 LSM14BQ9BX40 385 aaKnown RBP16.58■□□□□ 0.25
PNKP-204ENST00000594661 JPH1Q9HDC5 661 aaPredicted RBP16.58■□□□□ 0.25
PNKP-204ENST00000594661 NLRC4Q9NPP4 1024 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 CHCHD3Q9NX63 227 aaKnown RBP16.58■□□□□ 0.25
PNKP-204ENST00000594661 DMGDHQ9UI17 866 aaKnown RBP16.58■□□□□ 0.25
PNKP-204ENST00000594661 NFASCO94856 1347 aa16.58■□□□□ 0.25
PNKP-204ENST00000594661 ZNF233A6NK53 670 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 HMGB1P1B2RPK0 211 aaPredicted RBP16.58■□□□□ 0.24
PNKP-204ENST00000594661 ZNF263O14978 683 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 CASP4P49662 377 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 KIF11P52732 1056 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 VAV2P52735 878 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 KIF5AQ12840 1032 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 STXBP2Q15833 593 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 LDLRAD1Q5T700 205 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 ANO5Q75V66 913 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 TBC1D31Q96DN5 1066 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 ATP6V1G3Q96LB4 118 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 CCDC43Q96MW1 224 aaKnown RBP16.58■□□□□ 0.24
PNKP-204ENST00000594661 STRA6Q9BX79 667 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 CEP72Q9P209 647 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 GABBR1Q9UBS5 961 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 SLC9A2Q9UBY0 812 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 UBE4BO95155 1302 aa16.58■□□□□ 0.24
PNKP-204ENST00000594661 GMNCA6NCL1 334 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 SOWAHBA6NEL2 793 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 AKR1B10O60218 316 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 ZNF862O60290 1169 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 KRT14P02533 472 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 PAPOLAP51003 745 aaKnown RBP16.57■□□□□ 0.24
PNKP-204ENST00000594661 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
PNKP-204ENST00000594661 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 MAP1SQ66K74 1059 aaPredicted RBP16.57■□□□□ 0.24
PNKP-204ENST00000594661 GPAT2Q6NUI2 795 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
PNKP-204ENST00000594661 ZFAND2BQ8WV99 257 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 CCT6BQ92526 530 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 EZH1Q92800 747 aaPredicted RBP16.57■□□□□ 0.24
PNKP-204ENST00000594661 ALS2CR12Q96Q35 445 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 IFIH1Q9BYX4 1025 aaKnown RBP16.57■□□□□ 0.24
PNKP-204ENST00000594661 YIPF3Q9GZM5 350 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 GPRC5CQ9NQ84 441 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 RBPJLQ9UBG7 517 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■■■■□ 21.1
PNKP-204ENST00000594661 CLEC11AQ9Y240 323 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 DUSP10Q9Y6W6 482 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 K7ENM7 598 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 NOL4O94818 638 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 MAGEA8P43361 318 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 ACTR2P61160 394 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 KCNH2Q12809 1159 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 FRMD5Q7Z6J6 570 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 MREGQ8N565 214 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 HDAC7Q8WUI4 952 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 SEC16BQ96JE7 1060 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 LRRC1Q9BTT6 524 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 TSGA10Q9BZW7 698 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 ZNF408Q9H9D4 720 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 ANKEF1Q9NU02 776 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 ARMCX3Q9UH62 379 aaPredicted RBP16.57■□□□□ 0.24
PNKP-204ENST00000594661 BAIAP2L1Q9UHR4 511 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 PCDHA13Q9Y5I0 950 aa16.57■□□□□ 0.24
PNKP-204ENST00000594661 MACROD2A1Z1Q3 448 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 STBD1O95210 358 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 RPL13P26373 211 aaKnown RBP16.56■□□□□ 0.24
PNKP-204ENST00000594661 POLR2FP61218 127 aaKnown RBP16.56■□□□□ 0.24
PNKP-204ENST00000594661 LAMB3Q13751 1172 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 Q3C1V9 767 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 C1QTNF12Q5T7M4 302 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 SWSAP1Q6NVH7 229 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 SEPT14Q6ZU15 432 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 STXBP4Q6ZWJ1 553 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 ANKRD23Q86SG2 305 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 CCDC60Q8IWA6 550 aaPredicted RBP16.56■□□□□ 0.24
PNKP-204ENST00000594661 ARFGAP2Q8N6H7 521 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 HVCN1Q96D96 273 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 SLC5A4Q9NY91 659 aa16.56■□□□□ 0.24
PNKP-204ENST00000594661 NOP53Q9NZM5 478 aaKnown RBP16.56■□□□□ 0.24
PNKP-204ENST00000594661 LARSQ9P2J5 1176 aaKnown RBP16.56■□□□□ 0.24
PNKP-204ENST00000594661 PCDHB13Q9Y5F0 798 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms