RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 P4HBP07237 508 aaKnown RBP17.73■□□□□ 0.43
LIG1-206ENST00000594067 CTNNA2P26232 953 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 ELF1P32519 619 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 MXI1P50539 228 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 DRG2P55039 364 aaKnown RBP17.73■□□□□ 0.43
LIG1-206ENST00000594067 LLGL1Q15334 1064 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 PPM1KQ8N3J5 372 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 EPS8L1Q8TE68 723 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 TMOD2Q9NZR1 351 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 COL20A1Q9P218 1284 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 TRPC6Q9Y210 931 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 PTPN22Q9Y2R2 807 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 CHN1P15882 459 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 CHRNA5P30532 468 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 MAP2K1Q02750 393 aaPredicted RBP17.73■□□□□ 0.43
LIG1-206ENST00000594067 SLC47A2Q86VL8 602 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 CDAN1Q8IWY9 1227 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 SCLT1Q96NL6 688 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 ADAM7Q9H2U9 754 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 GPRC5CQ9NQ84 441 aa17.73■□□□□ 0.43
LIG1-206ENST00000594067 NOCTQ9UK39 431 aaKnown RBP17.73■□□□□ 0.43
LIG1-206ENST00000594067 CCT8L1PA6NM43 557 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 YDJCA8MPS7 323 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 ANKRD63C9JTQ0 380 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 MMEP08473 750 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 PLS3P13797 630 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 HSPA6P17066 643 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 FGFR4P22455 802 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 KCNJ1P48048 391 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 RARRES1P49788 294 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 IFI35P80217 286 aaPredicted RBP17.72■□□□□ 0.43
LIG1-206ENST00000594067 SF3A3Q12874 501 aaKnown RBP eCLIP17.72■□□□□ 0.432e-6■■■■□ 21
LIG1-206ENST00000594067 MIGA2Q7L4E1 593 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 HAUS6Q7Z4H7 955 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 ELMO3Q96BJ8 720 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 KREMEN1Q96MU8 473 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 RPS6KC1Q96S38 1066 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 DONSONQ9NYP3 566 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 PCYOX1Q9UHG3 505 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 MYH11P35749 1972 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 H0YIN7 160 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 SLC16A4O15374 487 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 P4HA2O15460 535 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 SPOPO43791 374 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 ADRB2P07550 413 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 MMP13P45452 471 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 KRT27Q7Z3Y8 459 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 CCDC105Q8IYK2 499 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 CCDC197Q8NCU1 140 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 ATXN2LQ8WWM7 1075 aaKnown RBP17.72■□□□□ 0.43
LIG1-206ENST00000594067 PGM2Q96G03 612 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 NUP85Q9BW27 656 aa17.72■□□□□ 0.43
LIG1-206ENST00000594067 RGS16O15492 202 aaPredicted RBP17.71■□□□□ 0.43
LIG1-206ENST00000594067 IBSPP21815 317 aaPredicted RBP17.71■□□□□ 0.43
LIG1-206ENST00000594067 SLCO1A2P46721 670 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 MKRN4PQ13434 485 aaPredicted RBP17.71■□□□□ 0.43
LIG1-206ENST00000594067 TCEAL1Q15170 157 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 NSMFQ6X4W1 530 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 TEX2Q8IWB9 1127 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 ZNF564Q8TBZ8 553 aaPredicted RBP17.71■□□□□ 0.43
LIG1-206ENST00000594067 SEMA4DQ92854 862 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 CCDC169A6NNP5 214 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 PODXLO00592 558 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 DHX15O43143 795 aaKnown RBP17.71■□□□□ 0.43
LIG1-206ENST00000594067 NF2P35240 595 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 PEX3P56589 373 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 ELF3P78545 371 aaPredicted RBP17.71■□□□□ 0.43
LIG1-206ENST00000594067 RASA3Q14644 834 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 PIGWQ7Z7B1 504 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 FAM71AQ8IYT1 594 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 CD101Q93033 1021 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 VTI1AQ96AJ9 217 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 CCDC127Q96BQ5 260 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 WNT8AQ9H1J5 351 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 MTRF1LQ9UGC7 380 aaKnown RBP17.71■□□□□ 0.43
LIG1-206ENST00000594067 PCDHA3Q9Y5H8 950 aa17.71■□□□□ 0.43
LIG1-206ENST00000594067 NFIBO00712 420 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 RARAP10276 462 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 COILP38432 576 aaPredicted RBP17.7■□□□□ 0.42
LIG1-206ENST00000594067 FMO1Q01740 532 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 FAM160B2Q86V87 743 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 SLC13A5Q86YT5 568 aaPredicted RBP17.7■□□□□ 0.42
LIG1-206ENST00000594067 CBWD2Q8IUF1 395 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 C12orf56Q8IXR9 622 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 EPS8L3Q8TE67 593 aaKnown RBP17.7■□□□□ 0.42
LIG1-206ENST00000594067 ZNF653Q96CK0 615 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 QTRT2Q9H974 415 aaKnown RBP17.7■□□□□ 0.42
LIG1-206ENST00000594067 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.7■□□□□ 0.42
LIG1-206ENST00000594067 ASAP2O43150 1006 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 MAPTP10636 758 aaKnown RBP17.7■□□□□ 0.42
LIG1-206ENST00000594067 ALAS1P13196 640 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 SPP2Q13103 211 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 ALCAMQ13740 583 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 E2F5Q15329 346 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 N4BP2L2Q92802 583 aaPredicted RBP17.7■□□□□ 0.42
LIG1-206ENST00000594067 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 SAAL1Q96ER3 474 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 POP1Q99575 1024 aaKnown RBP17.7■□□□□ 0.42
LIG1-206ENST00000594067 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.7■□□□□ 0.424e-7■■■■□ 20.6
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms