RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 HUS1O60921 280 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 PSMA2P25787 234 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 GUCY1A3Q02108 690 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 HSP90AA5PQ58FG0 334 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 GLIS2Q9BZE0 524 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-228ENST00000592705 TUFT1Q9NNX1 390 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 FGFR1OP2Q9NVK5 253 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 AMACRQ9UHK6 382 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 SLIT1O75093 1534 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 CALB1P05937 261 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 OR6B2Q6IFH4 312 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 NDUFAF2Q8N183 169 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 SNF8Q96H20 258 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 RNPC3Q96LT9 517 aaKnown RBP13.54□□□□□ -0.24
DNMT1-228ENST00000592705 TRIM55Q9BYV6 548 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 CACYBPQ9HB71 228 aaKnown RBP13.54□□□□□ -0.24
DNMT1-228ENST00000592705 MROH2AA6NES4 1674 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 WDR91A4D1P6 747 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 CFAP73A6NFT4 308 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 AKR1B1P15121 316 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 ENOSF1Q7L5Y1 443 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 TMEM35BQ8NCS4 154 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 ERGIC2Q96RQ1 377 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 AGXT2Q9BYV1 514 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 MST1RQ04912 1400 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 MYMKA6NI61 221 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 MEFVO15553 781 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-228ENST00000592705 KRT37O76014 449 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 EDRF1Q3B7T1 1238 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 CFAP36Q96G28 342 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 AGPAT1Q99943 283 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 HEMGNQ9BXL5 484 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-228ENST00000592705 SAT1P21673 171 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-228ENST00000592705 KLHL38Q2WGJ6 581 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 MMEL1Q495T6 779 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 MS4A14Q96JA4 679 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 VCPKMTQ9H867 229 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 IRAK4Q9NWZ3 460 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 CPA4Q9UI42 421 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 AFG3L2Q9Y4W6 797 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 SLC16A4O15374 487 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 BNIP3LO60238 219 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 GPC4O75487 556 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 SMARCA1P28370 1054 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 QARSP47897 775 aaKnown RBP13.53□□□□□ -0.24
DNMT1-228ENST00000592705 BYSLQ13895 437 aaKnown RBP13.53□□□□□ -0.24
DNMT1-228ENST00000592705 POTEAQ6S8J7 498 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 SRRM1Q8IYB3 904 aaKnown RBP13.53□□□□□ -0.24
DNMT1-228ENST00000592705 SYN2Q92777 582 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-228ENST00000592705 CCDC68Q9H2F9 335 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 IPO11Q9UI26 975 aaKnown RBP13.53□□□□□ -0.24
DNMT1-228ENST00000592705 VWDEQ8N2E2 1590 aa13.53□□□□□ -0.24
DNMT1-228ENST00000592705 ZBED1O96006 694 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 RAPH1Q70E73 1250 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 PARP9Q8IXQ6 854 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 FBXL16Q8N461 479 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 NOA1Q8NC60 698 aaKnown RBP13.52□□□□□ -0.24
DNMT1-228ENST00000592705 SLC38A10Q9HBR0 1119 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 MTMR4Q9NYA4 1195 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 DONSONQ9NYP3 566 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 MAP2P11137 1827 aaKnown RBP13.52□□□□□ -0.24
DNMT1-228ENST00000592705 FOXP2O15409 715 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 TOM1L1O75674 476 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 BRAFP15056 766 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 AP1ARQ63HQ0 302 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 RHPN2Q8IUC4 686 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 SYT2Q8N9I0 419 aaPredicted RBP13.52□□□□□ -0.24
DNMT1-228ENST00000592705 OR6B3Q8NGW1 331 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 STK33Q9BYT3 514 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 ZWILCHQ9H900 591 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 THEGQ9P2T0 379 aa13.52□□□□□ -0.24
DNMT1-228ENST00000592705 FNDC3AQ9Y2H6 1198 aaKnown RBP13.52□□□□□ -0.24
DNMT1-228ENST00000592705 EPHA7Q15375 998 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 NAB2Q15742 525 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 LXNQ9BS40 222 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 STARD7Q9NQZ5 370 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 RBM12Q9NTZ6 932 aaKnown RBP13.52□□□□□ -0.25
DNMT1-228ENST00000592705 MID2Q9UJV3 735 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 F8W8V4 182 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 TBX3O15119 743 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 CLDN3O15551 220 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 RTN2O75298 545 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 TBXAS1P24557 533 aaPredicted RBP13.52□□□□□ -0.25
DNMT1-228ENST00000592705 ZNF543Q08ER8 600 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 GLB1LQ6UWU2 654 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 TRIM59Q8IWR1 403 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 DAGLBQ8NCG7 672 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 DNAJC7Q99615 494 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 SMARCAD1Q9H4L7 1026 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 STRIP2Q9ULQ0 834 aa13.52□□□□□ -0.25
DNMT1-228ENST00000592705 GSTA1P08263 222 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 GSTA2P09210 222 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 UCHL3P15374 230 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 ZNF568Q3ZCX4 644 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 SWSAP1Q6NVH7 229 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 CCNYQ8ND76 341 aa13.51□□□□□ -0.25
DNMT1-228ENST00000592705 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms