RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 NYAP1Q6ZVC0 841 aa18.48■□□□□ 0.55
GCDH-212ENST00000590530 ZBTB33Q86T24 672 aa18.48■□□□□ 0.55
GCDH-212ENST00000590530 XXYLT1Q8NBI6 393 aa18.48■□□□□ 0.55
GCDH-212ENST00000590530 ZNF397Q8NF99 534 aaPredicted RBP18.48■□□□□ 0.55
GCDH-212ENST00000590530 SLC35C1Q96A29 364 aa18.48■□□□□ 0.55
GCDH-212ENST00000590530 SCLT1Q96NL6 688 aa18.48■□□□□ 0.55
GCDH-212ENST00000590530 OSMRQ99650 979 aa18.48■□□□□ 0.55
GCDH-212ENST00000590530 ACO2Q99798 780 aaKnown RBP18.48■□□□□ 0.55
GCDH-212ENST00000590530 PAK6Q9NQU5 681 aaPredicted RBP18.48■□□□□ 0.55
GCDH-212ENST00000590530 STYXL1Q9Y6J8 313 aa18.48■□□□□ 0.55
GCDH-212ENST00000590530 KAT6AQ92794 2004 aa18.47■□□□□ 0.55
GCDH-212ENST00000590530 TULP1O00294 542 aaPredicted RBP18.47■□□□□ 0.55
GCDH-212ENST00000590530 MAPK13O15264 365 aa18.47■□□□□ 0.55
GCDH-212ENST00000590530 PHKA2P46019 1235 aa18.47■□□□□ 0.55
GCDH-212ENST00000590530 WNT7BP56706 349 aa18.47■□□□□ 0.55
GCDH-212ENST00000590530 ITGA7Q13683 1181 aa18.47■□□□□ 0.55
GCDH-212ENST00000590530 DCAF17Q5H9S7 520 aaPredicted RBP18.47■□□□□ 0.55
GCDH-212ENST00000590530 CPB2Q96IY4 423 aa18.47■□□□□ 0.55
GCDH-212ENST00000590530 FAM213AQ9BRX8 229 aa18.47■□□□□ 0.55
GCDH-212ENST00000590530 C2orf40Q9H1Z8 148 aa18.47■□□□□ 0.55
GCDH-212ENST00000590530 TRMT13Q9NUP7 481 aaKnown RBP18.47■□□□□ 0.55
GCDH-212ENST00000590530 GTPBP10A4D1E9 387 aaKnown RBP18.46■□□□□ 0.55
GCDH-212ENST00000590530 SOWAHDA6NJG2 315 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 ACKR2O00590 384 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 ACOT2P49753 483 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 APBA1Q02410 837 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 TSR1Q2NL82 804 aaKnown RBP18.46■□□□□ 0.55
GCDH-212ENST00000590530 C1orf220Q5T0J3 134 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 IFNLR1Q8IU57 520 aaPredicted RBP18.46■□□□□ 0.55
GCDH-212ENST00000590530 NEK11Q8NG66 645 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 MRPL4Q9BYD3 311 aaKnown RBP18.46■□□□□ 0.55
GCDH-212ENST00000590530 NFKBIZQ9BYH8 718 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 OSBPL7Q9BZF2 842 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 RNF208Q9H0X6 261 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 MMRN2Q9H8L6 949 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 FAM207AQ9NSI2 230 aaPredicted RBP18.46■□□□□ 0.55
GCDH-212ENST00000590530 AGPAT5Q9NUQ2 364 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 TRMT1Q9NXH9 659 aaKnown RBP18.46■□□□□ 0.55
GCDH-212ENST00000590530 PPP2R2CQ9Y2T4 447 aa18.46■□□□□ 0.55
GCDH-212ENST00000590530 A0A1W2PQ45 241 aaPredicted RBP18.46■□□□□ 0.54
GCDH-212ENST00000590530 A0A1W2PQY0 241 aa18.46■□□□□ 0.54
GCDH-212ENST00000590530 GOLGA6L9A6NEM1 432 aa18.46■□□□□ 0.54
GCDH-212ENST00000590530 KIF2AO00139 706 aaPredicted RBP18.46■□□□□ 0.54
GCDH-212ENST00000590530 HNRNPH3P31942 346 aaKnown RBP18.46■□□□□ 0.54
GCDH-212ENST00000590530 CDK17Q00537 523 aa18.46■□□□□ 0.54
GCDH-212ENST00000590530 POU5F1BQ06416 359 aa18.46■□□□□ 0.54
GCDH-212ENST00000590530 PRPF4BQ13523 1007 aaKnown RBP18.46■□□□□ 0.54
GCDH-212ENST00000590530 DNTTIP2Q5QJE6 756 aaKnown RBP18.46■□□□□ 0.54
GCDH-212ENST00000590530 TCERG1LQ5VWI1 586 aa18.46■□□□□ 0.54
GCDH-212ENST00000590530 CRELD2Q6UXH1 353 aaPredicted RBP18.46■□□□□ 0.54
GCDH-212ENST00000590530 RAD9BQ6WBX8 426 aa18.46■□□□□ 0.54
GCDH-212ENST00000590530 C16orf45Q96MC5 204 aaPredicted RBP18.46■□□□□ 0.54
GCDH-212ENST00000590530 POP1Q99575 1024 aaKnown RBP18.46■□□□□ 0.54
GCDH-212ENST00000590530 PTPRHQ9HD43 1115 aa18.46■□□□□ 0.54
GCDH-212ENST00000590530 A0A0B4J269 797 aa18.45■□□□□ 0.54
GCDH-212ENST00000590530 EPHB6O15197 1021 aa18.45■□□□□ 0.54
GCDH-212ENST00000590530 HSPA1AP0DMV8 641 aaKnown RBP18.45■□□□□ 0.54
GCDH-212ENST00000590530 HSPA1BP0DMV9 641 aaKnown RBP18.45■□□□□ 0.54
GCDH-212ENST00000590530 GNAT1P11488 350 aa18.45■□□□□ 0.54
GCDH-212ENST00000590530 GARTP22102 1010 aa18.45■□□□□ 0.54
GCDH-212ENST00000590530 SNRNP35Q16560 246 aaKnown RBP18.45■□□□□ 0.54
GCDH-212ENST00000590530 TOGARAM2Q6ZUX3 1019 aa18.45■□□□□ 0.54
GCDH-212ENST00000590530 FBXL18Q96ME1 805 aa18.45■□□□□ 0.54
GCDH-212ENST00000590530 CRACR2AQ9BSW2 395 aa18.45■□□□□ 0.54
GCDH-212ENST00000590530 CEP72Q9P209 647 aa18.45■□□□□ 0.54
GCDH-212ENST00000590530 AGO2Q9UKV8 859 aaKnown RBP18.45■□□□□ 0.54
GCDH-212ENST00000590530 FAM189A1O60320 539 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 TSPAN1O60635 241 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 ARF4P18085 180 aaPredicted RBP18.44■□□□□ 0.54
GCDH-212ENST00000590530 TNFSF9P41273 254 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 MATR3P43243 847 aaKnown RBP eCLIP18.44■□□□□ 0.54
GCDH-212ENST00000590530 MCCD1P59942 119 aaPredicted RBP18.44■□□□□ 0.54
GCDH-212ENST00000590530 PTGISQ16647 500 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 ATF7IP2Q5U623 682 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 WDR59Q6PJI9 974 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 ZPBP2Q6X784 338 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 TSHZ1Q6ZSZ6 1077 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 CTU1Q7Z7A3 348 aaKnown RBP18.44■□□□□ 0.54
GCDH-212ENST00000590530 SERINC5Q86VE9 423 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 SESTD1Q86VW0 696 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 CEP120Q8N960 986 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 LSM14BQ9BX40 385 aaKnown RBP18.44■□□□□ 0.54
GCDH-212ENST00000590530 PLCB1Q9NQ66 1216 aa18.44■□□□□ 0.54
GCDH-212ENST00000590530 ZNHIT6Q9NWK9 470 aaKnown RBP18.44■□□□□ 0.54
GCDH-212ENST00000590530 MOXD2PA6NHM9 499 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 TOM1L1O75674 476 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 TUBB4AP04350 444 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 CTSHP09668 335 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 CCDC175P0C221 793 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 PROZP22891 400 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 MTF1Q14872 753 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 PTPN14Q15678 1187 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 INTS8Q75QN2 995 aaKnown RBP18.43■□□□□ 0.54
GCDH-212ENST00000590530 ZNF410Q86VK4 478 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 REXO1L1PQ8IX06 675 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 GPD1LQ8N335 351 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 BAP1Q92560 729 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 DHX38Q92620 1227 aaKnown RBP18.43■□□□□ 0.54
GCDH-212ENST00000590530 CCDC127Q96BQ5 260 aa18.43■□□□□ 0.54
GCDH-212ENST00000590530 GLT1D1Q96MS3 346 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms