RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 CYP26C1Q6V0L0 522 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 APBB1IPQ7Z5R6 666 aaPredicted RBP8.41□□□□□ -1.06
NPC1-208ENST00000590301 CABP7Q86V35 215 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 TMEM173Q86WV6 379 aaPredicted RBP8.41□□□□□ -1.06
NPC1-208ENST00000590301 SLC22A17Q8WUG5 538 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 BCL7CQ8WUZ0 217 aaPredicted RBP8.41□□□□□ -1.06
NPC1-208ENST00000590301 KIFAP3Q92845 792 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 RPGRIP1Q96KN7 1286 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 IFT74Q96LB3 600 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 COLEC11Q9BWP8 271 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 EIF2AQ9BY44 585 aaKnown RBP8.41□□□□□ -1.06
NPC1-208ENST00000590301 FZD8Q9H461 694 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 MRPL17Q9NRX2 175 aaKnown RBP8.41□□□□□ -1.06
NPC1-208ENST00000590301 DNAJB4Q9UDY4 337 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 LRWD1Q9UFC0 647 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 USTQ9Y2C2 406 aa8.41□□□□□ -1.06
NPC1-208ENST00000590301 N4BP3O15049 544 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 POMCP01189 267 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 ADH1AP07327 375 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 KLRC2P26717 231 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 CCT6AP40227 531 aaKnown RBP8.4□□□□□ -1.06
NPC1-208ENST00000590301 MLH1P40692 756 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 PRPHP41219 470 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 OR1G1P47890 313 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 ZXDAP98168 799 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 CREMQ03060 361 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 GRIK3Q13003 919 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 MAPK6Q16659 721 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 PTPN21Q16825 1174 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 RILPL1Q5EBL4 403 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 ATAT1Q5SQI0 421 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 KIAA1841Q6NSI8 718 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 C15orf39Q6ZRI6 1047 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 TRIM67Q6ZTA4 783 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 COLGALT2Q8IYK4 626 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 C4orf32Q8N8J7 132 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 IGSF22Q8N9C0 903 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 DEPTORQ8TB45 409 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 HDAC7Q8WUI4 952 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 CPB2Q96IY4 423 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 FBXL18Q96ME1 805 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 RPS6KC1Q96S38 1066 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 GAD1Q99259 594 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 ADPGKQ9BRR6 497 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 HERC2P3Q9BVR0 1158 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 VN1R3Q9BXE9 311 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 RHOBTB2Q9BYZ6 727 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 NXF3Q9H4D5 531 aaKnown RBP8.4□□□□□ -1.06
NPC1-208ENST00000590301 SFXN1Q9H9B4 322 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.4□□□□□ -1.06
NPC1-208ENST00000590301 RAPGEFL1Q9UHV5 662 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 KCNG1Q9UIX4 513 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 KAT6AQ92794 2004 aa8.4□□□□□ -1.06
NPC1-208ENST00000590301 PIEZO1Q92508 2521 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 TMEM221A6NGB7 291 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 M0R296 226 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 ACKR2O00590 384 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 B4GALT5O43286 388 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 B4GALT3O60512 393 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 LILRB3O75022 631 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 NPTXRO95502 500 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 EFEMP2O95967 443 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 CNPP09543 421 aaKnown RBP8.39□□□□□ -1.07
NPC1-208ENST00000590301 GLUD2P49448 558 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 SCNN1GP51170 649 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 CLCN4P51793 760 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
NPC1-208ENST00000590301 DSG1Q02413 1049 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 SIGLEC14Q08ET2 396 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 PTGDRQ13258 359 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 PRPF4BQ13523 1007 aaKnown RBP8.39□□□□□ -1.07
NPC1-208ENST00000590301 DCAF4L1Q3SXM0 396 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 KRT79Q5XKE5 535 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 DTHD1Q6ZMT9 781 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 HFE2Q6ZVN8 426 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 UBALD2Q8IYN6 164 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 RNF168Q8IYW5 571 aaPredicted RBP8.39□□□□□ -1.07
NPC1-208ENST00000590301 ZDHHC14Q8IZN3 488 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 CMASQ8NFW8 434 aaPredicted RBP8.39□□□□□ -1.07
NPC1-208ENST00000590301 AUTS2Q8WXX7 1259 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 KLHL5Q96PQ7 755 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 PRRX2Q99811 253 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 TIPINQ9BVW5 301 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 MFRPQ9BY79 579 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 KDM4CQ9H3R0 1056 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 C17orf75Q9HAS0 396 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 RXFP1Q9HBX9 757 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 GPRC5CQ9NQ84 441 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 CHST7Q9NS84 486 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 MARCH5Q9NX47 278 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 DNM3Q9UQ16 869 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 PRG3Q9Y2Y8 225 aaPredicted RBP8.39□□□□□ -1.07
NPC1-208ENST00000590301 HES2Q9Y543 173 aa8.39□□□□□ -1.07
NPC1-208ENST00000590301 SF3B1O75533 1304 aaKnown RBP eCLIP8.38□□□□□ -1.07
NPC1-208ENST00000590301 SLC26A4O43511 780 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 PRKCBP05771 671 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 EPCAMP16422 314 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 ELAVL2Q12926 359 aaKnown RBP8.38□□□□□ -1.07
NPC1-208ENST00000590301 TUSC3Q13454 348 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 MTMR3Q13615 1198 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms