RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 ASIC3Q9UHC3 531 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 LRRD1A4D1F6 860 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 CBX6O95503 412 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 ECEL1O95672 775 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 ATP6V1C1P21283 382 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 VPS41P49754 854 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 PPP4CP60510 307 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 KRT17Q04695 432 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 DNAJC3Q13217 504 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 CYFIP1Q7L576 1253 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 LONP2Q86WA8 852 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 RHOT2Q8IXI1 618 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 SYT2Q8N9I0 419 aaPredicted RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 RDH13Q8NBN7 331 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 AGPAT1Q99943 283 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 MXD3Q9BW11 206 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 INTS2Q9H0H0 1204 aaKnown RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 CPSF2Q9P2I0 782 aaKnown RBP16.89■□□□□ 0.29
MBD1-222ENST00000590208 NAALADL1Q9UQQ1 740 aa16.89■□□□□ 0.29
MBD1-222ENST00000590208 TTC4O95801 387 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 WDR4P57081 412 aaKnown RBP16.88■□□□□ 0.29
MBD1-222ENST00000590208 TMEM154Q6P9G4 183 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 ZCWPW1Q9H0M4 648 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 ACP6Q9NPH0 428 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 FRMPD4Q14CM0 1322 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 MYO3BQ8WXR4 1341 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 CLDN3O15551 220 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 T-ENOLP0DO92 83 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 CYP2J2P51589 502 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 SESN3P58005 492 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 CYP1B1Q16678 543 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 PRR16Q569H4 304 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 TMEM63BQ5T3F8 832 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 RNF220Q5VTB9 566 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 KCTD1Q719H9 257 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 LMNTD2Q8IXW0 634 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 UCMAQ8WVF2 138 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 ATG4AQ8WYN0 398 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 NKIRAS1Q9NYS0 192 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 APEX2Q9UBZ4 518 aa16.88■□□□□ 0.29
MBD1-222ENST00000590208 DDX60LQ5H9U9 1706 aaKnown RBP16.88■□□□□ 0.29
MBD1-222ENST00000590208 ARFGEF1Q9Y6D6 1849 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 THAP12O43422 761 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 SPAG7O75391 227 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 PSMC2P35998 433 aaKnown RBP16.87■□□□□ 0.29
MBD1-222ENST00000590208 RFC5P40937 340 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 SPIRE1Q08AE8 756 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 CLUL1Q15846 466 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 PARP6Q2NL67 630 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 CWF19L1Q69YN2 538 aaKnown RBP16.87■□□□□ 0.29
MBD1-222ENST00000590208 C11orf63Q6NUN7 778 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 SLC30A10Q6XR72 485 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 RNF207Q6ZRF8 634 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 SLC7A6OSQ96CW6 309 aaPredicted RBP16.87■□□□□ 0.29
MBD1-222ENST00000590208 DENND2DQ9H6A0 471 aaPredicted RBP16.87■□□□□ 0.29
MBD1-222ENST00000590208 MTUS1Q9ULD2 1270 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 C2CD2Q9Y426 696 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 ATP5DP30049 168 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 POLGP54098 1239 aaPredicted RBP16.87■□□□□ 0.29
MBD1-222ENST00000590208 KCNQ4P56696 695 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 MKRN3Q13064 507 aaKnown RBP16.87■□□□□ 0.29
MBD1-222ENST00000590208 SETDB1Q15047 1291 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 FAM98CQ17RN3 349 aaKnown RBP16.87■□□□□ 0.29
MBD1-222ENST00000590208 ASPRV1Q53RT3 343 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 ARHGEF18Q6ZSZ5 1173 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 ASAP3Q8TDY4 903 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 LRRC37BQ96QE4 947 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 DLGAP2Q9P1A6 1054 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 USP21Q9UK80 565 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 ZMYM2Q9UBW7 1377 aa16.87■□□□□ 0.29
MBD1-222ENST00000590208 SPOPO43791 374 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 CCDC15Q0P6D6 951 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 ACVR2BQ13705 512 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 BMT2Q1RMZ1 405 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 RHBDF2Q6PJF5 856 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 PHC3Q8NDX5 983 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 WDR66Q8TBY9 1149 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 ANKRD2Q9GZV1 360 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
MBD1-222ENST00000590208 LAMB2P55268 1798 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 NAV1Q8NEY1 1877 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 TBCAO75347 108 aaKnown RBP16.86■□□□□ 0.29
MBD1-222ENST00000590208 AKR1B1P15121 316 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 ITGA8P53708 1063 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 MRPS35P82673 323 aaKnown RBP16.86■□□□□ 0.29
MBD1-222ENST00000590208 PPP1R15BQ5SWA1 713 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 NSMFQ6X4W1 530 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 KIAA0825Q8IV33 1275 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 C7orf43Q8WVR3 580 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 C9orf72Q96LT7 481 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 CHST7Q9NS84 486 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 NINJ2Q9NZG7 142 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 SPATA31A1Q5TZJ5 1347 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 TULP1O00294 542 aaPredicted RBP16.86■□□□□ 0.29
MBD1-222ENST00000590208 GPC5P78333 572 aa16.86■□□□□ 0.29
MBD1-222ENST00000590208 ZNF543Q08ER8 600 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms