RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-209ENST00000589318 KLHDC7AQ5VTJ3 777 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 DEPTORQ8TB45 409 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 ZBTB10Q96DT7 871 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 SAAL1Q96ER3 474 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 VIPAS39Q9H9C1 493 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 PDE11AQ9HCR9 933 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 DONSONQ9NYP3 566 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 GCNT4Q9P109 453 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 ARHGAP20Q9P2F6 1191 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 USP20Q9Y2K6 914 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 EPN1Q9Y6I3 576 aaPredicted RBP16.7■□□□□ 0.26
DDX39A-209ENST00000589318 STYXL1Q9Y6J8 313 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 C22orf31O95567 290 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 PLEKP08567 350 aaPredicted RBP16.7■□□□□ 0.26
DDX39A-209ENST00000589318 VAMP7P51809 220 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 CHMP4BP1P59074 171 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 SNRNP35Q16560 246 aaKnown RBP16.7■□□□□ 0.26
DDX39A-209ENST00000589318 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
DDX39A-209ENST00000589318 CYP4F22Q6NT55 531 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 CACNA2D4Q7Z3S7 1137 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 EXOC8Q8IYI6 725 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 TCP11Q8WWU5 503 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 TMEM134Q9H6X4 195 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 NHEJ1Q9H9Q4 299 aaPredicted RBP16.7■□□□□ 0.26
DDX39A-209ENST00000589318 SUGCTQ9HAC7 445 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 L1RE1Q9UN81 338 aa16.7■□□□□ 0.26
DDX39A-209ENST00000589318 GNEQ9Y223 722 aaKnown RBP16.7■□□□□ 0.26
DDX39A-209ENST00000589318 K7ERI5 159 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 KRT13P13646 458 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 INSRRP14616 1297 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 UCHL3P15374 230 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 CYP2B6P20813 491 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 PPP3CAQ08209 521 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 LAMTOR4Q0VGL1 99 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 OLFML2BQ68BL8 750 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 HGSNATQ68CP4 663 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 OR6J1Q8NGC5 347 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 PSPC1Q8WXF1 523 aaKnown RBP16.69■□□□□ 0.26
DDX39A-209ENST00000589318 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 POMGNT1Q8WZA1 660 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 HAPLN2Q9GZV7 340 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 CCDC113Q9H0I3 377 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 ZNHIT6Q9NWK9 470 aaKnown RBP16.69■□□□□ 0.26
DDX39A-209ENST00000589318 FBXL5Q9UKA1 691 aa16.69■□□□□ 0.26
DDX39A-209ENST00000589318 AJAP1Q9UKB5 411 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-209ENST00000589318 TNFAIP2Q03169 654 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 ZNF484Q5JVG2 852 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 LINC01465Q8N7H1 131 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 LMO3Q8TAP4 145 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 SYN2Q92777 582 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-209ENST00000589318 BICD1Q96G01 975 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 APBA2Q99767 749 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 TNPO2O14787 897 aaKnown RBP16.68■□□□□ 0.26
DDX39A-209ENST00000589318 FANCGO15287 622 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 RGS2P41220 211 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 STRN3Q13033 797 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 MXD4Q14582 209 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-209ENST00000589318 CCDC170Q8IYT3 715 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 MFSD14AQ96MC6 490 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 JPH2Q9BR39 696 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-209ENST00000589318 KAT6AQ92794 2004 aa16.68■□□□□ 0.26
DDX39A-209ENST00000589318 TTLL13PA6NNM8 815 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 H3BRB1 525 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 MSCO60682 206 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 GJB1P08034 283 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 MCM3P25205 808 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 BRD2P25440 801 aaKnown RBP16.67■□□□□ 0.26
DDX39A-209ENST00000589318 LIG4P49917 911 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 CLCN3P51790 818 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 MYL7Q01449 175 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 GRM1Q13255 1194 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 EFCAB12Q6NXP0 572 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 GJB7Q6PEY0 223 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 LRRC31Q6UY01 552 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 GPIHBP1Q8IV16 184 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 GPD1LQ8N335 351 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 PARD3BQ8TEW8 1205 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 ZBTB9Q96C00 473 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 ZBTB45Q96K62 511 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-209ENST00000589318 TARS2Q9BW92 718 aaKnown RBP16.67■□□□□ 0.26
DDX39A-209ENST00000589318 NUCKS1Q9H1E3 243 aaKnown RBP16.67■□□□□ 0.26
DDX39A-209ENST00000589318 CXorf56Q9H5V9 222 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 TUT1Q9H6E5 874 aaKnown RBP16.67■□□□□ 0.26
DDX39A-209ENST00000589318 AIPL1Q9NZN9 384 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 SUCLA2Q9P2R7 463 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-209ENST00000589318 COL1A2P08123 1366 aa16.67■□□□□ 0.26
DDX39A-209ENST00000589318 A6NJR5 290 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 ZNF263O14978 683 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 PMM2O15305 246 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 TOMM70O94826 608 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 ABL1P00519 1130 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 JAM2P57087 298 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 CYP24A1Q07973 514 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 DGKDQ16760 1214 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 ASTE1Q2TB18 679 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-209ENST00000589318 RNF149Q8NC42 400 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 LENG1Q96BZ8 264 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-209ENST00000589318 LRRIQ3A6PVS8 624 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-209ENST00000589318 SRGAP2CP0DJJ0 459 aa16.66■□□□□ 0.26
DDX39A-209ENST00000589318 KLRC1P26715 233 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms