RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 PSMC5P62195 406 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 KRT76Q01546 638 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 GHRHRQ02643 423 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 TKFCQ3LXA3 575 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 EAPPQ56P03 285 aaPredicted RBP8□□□□□ -1.13
ZNF540-206ENST00000589117 KLHL7Q8IXQ5 586 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 C4orf19Q8IY42 314 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 RGL4Q8IZJ4 473 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 UBL4BQ8N7F7 174 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 C1orf131Q8NDD1 294 aaKnown RBP8□□□□□ -1.13
ZNF540-206ENST00000589117 ARMC2Q8NEN0 867 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 RDM1Q8NG50 284 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 SLC30A5Q8TAD4 765 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 SCFD2Q8WU76 684 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 AGBL1Q96MI9 1066 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 FIZ1Q96SL8 496 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 STRA6Q9BX79 667 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 CAPS2Q9BXY5 557 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 KIAA1683Q9H0B3 1180 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 SAP130Q9H0E3 1048 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 RAB17Q9H0T7 212 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 ST6GALNAC4Q9H4F1 302 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 ZNF277Q9NRM2 450 aaPredicted RBP8□□□□□ -1.13
ZNF540-206ENST00000589117 FBXO28Q9NVF7 368 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 SMARCAL1Q9NZC9 954 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 EHD2Q9NZN4 543 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 TTC7AQ9ULT0 858 aaPredicted RBP8□□□□□ -1.13
ZNF540-206ENST00000589117 PCDHB11Q9Y5F2 797 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 ZHX2Q9Y6X8 837 aa8□□□□□ -1.13
ZNF540-206ENST00000589117 MIF4GDA9UHW6 222 aaKnown RBP7.99□□□□□ -1.13
ZNF540-206ENST00000589117 WDR64B1ANS9 1081 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 PMM2O15305 246 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 SART1O43290 800 aaKnown RBP7.99□□□□□ -1.13
ZNF540-206ENST00000589117 CTNND1O60716 968 aaKnown RBP7.99□□□□□ -1.13
ZNF540-206ENST00000589117 HSPA6P17066 643 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 TAL1P17542 331 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-206ENST00000589117 YWHABP31946 246 aaKnown RBP7.99□□□□□ -1.13
ZNF540-206ENST00000589117 KIF22Q14807 665 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 ARHGAP44Q17R89 818 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 NT5DC3Q86UY8 548 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 CD302Q8IX05 232 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 CPXCR1Q8N123 301 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 RASGEF1CQ8N431 466 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 METTL13Q8N6R0 699 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 SLC35G2Q8TBE7 412 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 MORC4Q8TE76 937 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 HVCN1Q96D96 273 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 HES6Q96HZ4 224 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 FAM81BQ96LP2 452 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 C17orf75Q9HAS0 396 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 AGO4Q9HCK5 861 aaKnown RBP7.99□□□□□ -1.13
ZNF540-206ENST00000589117 UBE2TQ9NPD8 197 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-206ENST00000589117 ANKEF1Q9NU02 776 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 UBIAD1Q9Y5Z9 338 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 RPTORQ8N122 1335 aa7.99□□□□□ -1.13
ZNF540-206ENST00000589117 RAD51CO43502 376 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 MPSTP25325 297 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 RARRES1P49788 294 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 MFAP3P55082 362 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 GTF2BQ00403 316 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 PLS1Q14651 629 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 COG2Q14746 738 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 CBWD6Q4V339 395 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 DNAJC21Q5F1R6 531 aaKnown RBP7.98□□□□□ -1.13
ZNF540-206ENST00000589117 CBWD3Q5JTY5 395 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 CBWD5Q5RIA9 395 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 RUFY4Q6ZNE9 571 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 MAEAQ7L5Y9 396 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 HAUS6Q7Z4H7 955 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 IQCKQ8N0W5 287 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 ARFGAP2Q8N6H7 521 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 RIN2Q8WYP3 895 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-206ENST00000589117 KIFAP3Q92845 792 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 AGPAT1Q99943 283 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 PLVAPQ9BX97 442 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 CARD9Q9H257 536 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 SLC38A10Q9HBR0 1119 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 FAM114A2Q9NRY5 505 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 NENFQ9UMX5 172 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 NOC2LQ9Y3T9 749 aaKnown RBP7.98□□□□□ -1.13
ZNF540-206ENST00000589117 KIF13BQ9NQT8 1826 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 LOXHD1Q8IVV2 1947 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 HMGB1P1B2RPK0 211 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-206ENST00000589117 H0YCG3 227 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 WNT10BO00744 389 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 SNPHO15079 494 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 SHOX2O60902 331 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-206ENST00000589117 TRIM49P0CI25 452 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 TRIM49CP0CI26 452 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 ABCB4P21439 1286 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 INPP5BP32019 993 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 GBP1P32455 592 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 CDR1P51861 262 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 HADHBP55084 474 aaKnown RBP7.98□□□□□ -1.13
ZNF540-206ENST00000589117 MCCD1P59942 119 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-206ENST00000589117 GPC5P78333 572 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 DMP1Q13316 513 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-206ENST00000589117 RASA3Q14644 834 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 ARHGEF16Q5VV41 709 aa7.98□□□□□ -1.13
ZNF540-206ENST00000589117 CIAPIN1Q6FI81 312 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms