RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 CLCA2Q9UQC9 943 aa4.69□□□□□ -1.66
SMAD4-207ENST00000589076 HS3ST4Q9Y661 456 aa4.69□□□□□ -1.66
SMAD4-207ENST00000589076 GRID2IPA4D2P6 1211 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 K7ESF4 209 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 S100BP04271 92 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-207ENST00000589076 ADCY1Q08828 1119 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 ITKQ08881 620 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 MTMR1Q13613 665 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 LRRC32Q14392 662 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 DDB1Q16531 1140 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 BROXQ5VW32 411 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 RD3Q7Z3Z2 195 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 HDGFL2Q7Z4V5 671 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-207ENST00000589076 RASSF3Q86WH2 238 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 CNTD1Q8N815 330 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 ZNF610Q8N9Z0 462 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 CAVIN3Q969G5 261 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 MYEOVQ96EZ4 313 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 DCLRE1CQ96SD1 692 aaKnown RBP4.68□□□□□ -1.66
SMAD4-207ENST00000589076 ELF4Q99607 663 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-207ENST00000589076 PDCD2LQ9BRP1 358 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 OSBPL6Q9BZF3 934 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 TOMM22Q9NS69 142 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 SPEF1Q9Y4P9 236 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 INSL6Q9Y581 213 aa4.68□□□□□ -1.66
SMAD4-207ENST00000589076 GRXCR1A8MXD5 290 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 RNASET2O00584 256 aaKnown RBP4.67□□□□□ -1.66
SMAD4-207ENST00000589076 KATNA1O75449 491 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 PRKD3O94806 890 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 HNRNPLP14866 589 aaKnown RBP eCLIP4.67□□□□□ -1.665e-7■■□□□ 14.3
SMAD4-207ENST00000589076 NR4A1P22736 598 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 ADCY2Q08462 1091 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 TERF2Q15554 542 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 C1QL3Q5VWW1 255 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 C7orf31Q8N865 590 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 BEND2Q8NDZ0 799 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 HIST1H2AHQ96KK5 128 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 BBC3Q96PG8 261 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-207ENST00000589076 HIST1H2AJQ99878 128 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 ASPSCR1Q9BZE9 553 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 KCNH6Q9H252 994 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 NOC2LQ9Y3T9 749 aaKnown RBP4.67□□□□□ -1.66
SMAD4-207ENST00000589076 COX11Q9Y6N1 276 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 COL4A3Q01955 1670 aa4.67□□□□□ -1.66
SMAD4-207ENST00000589076 GAGE12BA1L429 117 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 GAGE12HA6NDE8 117 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 HOXA3O43365 443 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-207ENST00000589076 ALDH1L1O75891 902 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 APOL3O95236 402 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 CD40P25942 277 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 MXRA7P84157 204 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 EPHA7Q15375 998 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 SYDE2Q5VT97 1194 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 FRMD7Q6ZUT3 714 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 PHYKPLQ8IUZ5 450 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 CLRN3Q8NCR9 226 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 OR5M3Q8NGP4 307 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 COG1Q8WTW3 980 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 MTMR8Q96EF0 704 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 AHCYL2Q96HN2 611 aaKnown RBP4.66□□□□□ -1.66
SMAD4-207ENST00000589076 SERHL2Q9H4I8 314 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 RSAD1Q9HA92 442 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 SPATA31A6Q5VVP1 1343 aa4.66□□□□□ -1.66
SMAD4-207ENST00000589076 HLA-DOAP06340 250 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 ZNF37AP17032 561 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-207ENST00000589076 PTX3P26022 381 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-207ENST00000589076 ZEB1P37275 1124 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-207ENST00000589076 ELLP55199 621 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-207ENST00000589076 WNT3AP56704 352 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 BLOC1S1P78537 153 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 VPS72Q15906 364 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 EPHA10Q5JZY3 1008 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 ODR4Q5SWX8 454 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 Q6YL49 198 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 NOL10Q9BSC4 688 aaKnown RBP4.65□□□□□ -1.67
SMAD4-207ENST00000589076 NDC1Q9BTX1 674 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 CCDC8Q9H0W5 538 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-207ENST00000589076 ZMAT4Q9H898 229 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 TRPM5Q9NZQ8 1165 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 USP36Q9P275 1121 aaKnown RBP4.65□□□□□ -1.67
SMAD4-207ENST00000589076 KCNG1Q9UIX4 513 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 TRHDEQ9UKU6 1024 aa4.65□□□□□ -1.67
SMAD4-207ENST00000589076 CENPVL1A0A0U1RR11 272 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 PRR5-ARHGAP8B1AHC4 643 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 GABRDO14764 452 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 HKR1P10072 659 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 EPHB1P54762 984 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 ERVK-21P61565 698 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 TTF1Q15361 905 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-207ENST00000589076 GDF7Q7Z4P5 450 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 ARHGEF19Q8IW93 802 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 CMTR2Q8IYT2 770 aaKnown RBP4.64□□□□□ -1.67
SMAD4-207ENST00000589076 COQ10AQ96MF6 247 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 WDR11Q9BZH6 1224 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 HAPLN2Q9GZV7 340 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 MTG2Q9H4K7 406 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 VTA1Q9NP79 307 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 KLHL42Q9P2K6 505 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 ANKFY1Q9P2R3 1169 aa4.64□□□□□ -1.67
SMAD4-207ENST00000589076 WASHC2AQ641Q2 1341 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms