RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 MXD4Q14582 209 aaPredicted RBP20.51■□□□□ 0.87
CCDC43-204ENST00000588687 POTEGQ6S5H5 508 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 CYP26C1Q6V0L0 522 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 OTUD6AQ7L8S5 288 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 FRMD5Q7Z6J6 570 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 FLCNQ8NFG4 579 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 B3GALT6Q96L58 329 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 NAP1L4Q99733 375 aaKnown RBP20.51■□□□□ 0.87
CCDC43-204ENST00000588687 NFKBIZQ9BYH8 718 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 IGSF9Q9P2J2 1179 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 EPS15L1Q9UBC2 864 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 CCDC195A0A1B0GUA6 201 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 SPDYE4A6NLX3 237 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 B4GALT5O43286 388 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 FDPSP14324 419 aaKnown RBP20.5■□□□□ 0.87
CCDC43-204ENST00000588687 ARL2P36404 184 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 SLFN12Q8IYM2 578 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 SIX5Q8N196 739 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 RSAD2Q8WXG1 361 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 MYADMQ96S97 322 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 EIF2AK1Q9BQI3 630 aaKnown RBP20.5■□□□□ 0.87
CCDC43-204ENST00000588687 GPR62Q9BZJ7 368 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 SSX2IPQ9Y2D8 614 aa20.5■□□□□ 0.87
CCDC43-204ENST00000588687 KRBA1A5PL33 1030 aa20.49■□□□□ 0.87
CCDC43-204ENST00000588687 INO80B-WBP1J3KQ70 363 aa20.49■□□□□ 0.87
CCDC43-204ENST00000588687 C1RP00736 705 aa20.49■□□□□ 0.87
CCDC43-204ENST00000588687 GLRA2P23416 452 aa20.49■□□□□ 0.87
CCDC43-204ENST00000588687 RARRES1P49788 294 aa20.49■□□□□ 0.87
CCDC43-204ENST00000588687 TPH2Q8IWU9 490 aa20.49■□□□□ 0.87
CCDC43-204ENST00000588687 GPR65Q8IYL9 337 aa20.49■□□□□ 0.87
CCDC43-204ENST00000588687 GIT1Q9Y2X7 761 aa20.49■□□□□ 0.87
CCDC43-204ENST00000588687 DOCK6Q96HP0 2047 aa20.49■□□□□ 0.87
CCDC43-204ENST00000588687 DGAT1O75907 488 aa20.48■□□□□ 0.87
CCDC43-204ENST00000588687 FUT10Q6P4F1 479 aa20.48■□□□□ 0.87
CCDC43-204ENST00000588687 LILRA6Q6PI73 481 aa20.48■□□□□ 0.87
CCDC43-204ENST00000588687 HDAC7Q8WUI4 952 aa20.48■□□□□ 0.87
CCDC43-204ENST00000588687 ANKEF1Q9NU02 776 aa20.48■□□□□ 0.87
CCDC43-204ENST00000588687 VWA8A3KMH1 1905 aa20.48■□□□□ 0.87
CCDC43-204ENST00000588687 EP300Q09472 2414 aaPredicted RBP20.48■□□□□ 0.87
CCDC43-204ENST00000588687 TGM5O43548 720 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 MYBP10242 640 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 XBP1P17861 261 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 AKAP5P24588 427 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 TFDP1Q14186 410 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 ANGPT1Q15389 498 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 CDR2LQ86X02 465 aaPredicted RBP20.47■□□□□ 0.87
CCDC43-204ENST00000588687 DTWD2Q8NBA8 298 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 SMG7Q92540 1137 aaKnown RBP20.47■□□□□ 0.87
CCDC43-204ENST00000588687 RTP3Q9BQQ7 232 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 APOL6Q9BWW8 343 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 FNIP2Q9P278 1114 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 ORC3Q9UBD5 711 aaPredicted RBP20.47■□□□□ 0.87
CCDC43-204ENST00000588687 CACNG4Q9UBN1 327 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 WNT16Q9UBV4 365 aa20.47■□□□□ 0.87
CCDC43-204ENST00000588687 A0A1B0GUA9 196 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 SPATA31D3P0C874 917 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 KRT2P35908 639 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 GRIK3Q13003 919 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 SLC27A1Q6PCB7 646 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 SPATA31D4Q6ZUB0 917 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 SLC44A3Q8N4M1 653 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 STAMQ92783 540 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 NKD2Q969F2 451 aaPredicted RBP20.46■□□□□ 0.87
CCDC43-204ENST00000588687 PAAF1Q9BRP4 392 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 NT5C3AQ9H0P0 336 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 PLEKHA4Q9H4M7 779 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 ZDHHC7Q9NXF8 308 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 DPP7Q9UHL4 492 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 ADAM28Q9UKQ2 775 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 FBXL21Q9UKT6 434 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 FANCMQ8IYD8 2048 aa20.46■□□□□ 0.87
CCDC43-204ENST00000588687 MYH15Q9Y2K3 1946 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 ANHXE9PGG2 379 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 LARGE1O95461 756 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 CFHP08603 1231 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 SRFP11831 508 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 GBP2P32456 591 aaPredicted RBP20.45■□□□□ 0.86
CCDC43-204ENST00000588687 CALCRLQ16602 461 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 CDCA2Q69YH5 1023 aaPredicted RBP20.45■□□□□ 0.86
CCDC43-204ENST00000588687 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 MTMR9Q96QG7 549 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 POLR3FQ9H1D9 316 aaPredicted RBP20.45■□□□□ 0.86
CCDC43-204ENST00000588687 TTC12Q9H892 705 aaPredicted RBP20.45■□□□□ 0.86
CCDC43-204ENST00000588687 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCDC43-204ENST00000588687 PCDHA12Q9UN75 941 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 COL4A3Q01955 1670 aa20.45■□□□□ 0.86
CCDC43-204ENST00000588687 OTOGLQ3ZCN5 2332 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 TTLL13PA6NNM8 815 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 MARCH6O60337 910 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 BAG4O95429 457 aaKnown RBP20.44■□□□□ 0.86
CCDC43-204ENST00000588687 NPTXRO95502 500 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 RPL17P18621 184 aaKnown RBP20.44■□□□□ 0.86
CCDC43-204ENST00000588687 HTR4Q13639 388 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 USP41Q3LFD5 358 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 RTP2Q5QGT7 225 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 ELMSAN1Q6PJG2 1045 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 PALB2Q86YC2 1186 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 PIGOQ8TEQ8 1089 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 RABGGTAQ92696 567 aa20.44■□□□□ 0.86
CCDC43-204ENST00000588687 COLEC11Q9BWP8 271 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms