RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 CCDC40Q4G0X9 1142 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 CNOT6LQ96LI5 555 aaKnown RBP24.69■■□□□ 1.54
ACTN4-210ENST00000588618 A0A1B0GUA9 196 aa24.68■■□□□ 1.54
ACTN4-210ENST00000588618 LDHAP00338 332 aaKnown RBP24.68■■□□□ 1.54
ACTN4-210ENST00000588618 HOXA11P31270 313 aaPredicted RBP24.68■■□□□ 1.54
ACTN4-210ENST00000588618 FILIP1Q7Z7B0 1213 aa24.68■■□□□ 1.54
ACTN4-210ENST00000588618 TRIM6Q9C030 488 aaPredicted RBP24.68■■□□□ 1.54
ACTN4-210ENST00000588618 PDZD7Q9H5P4 517 aa24.68■■□□□ 1.54
ACTN4-210ENST00000588618 ALPK3Q96L96 1907 aa24.68■■□□□ 1.54
ACTN4-210ENST00000588618 TANC1Q9C0D5 1861 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 CCDC85CA6NKD9 419 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 KCNJ18B7U540 433 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 PARNO95453 639 aaKnown RBP24.67■■□□□ 1.54
ACTN4-210ENST00000588618 ZSCAN20P17040 1043 aaPredicted RBP24.67■■□□□ 1.54
ACTN4-210ENST00000588618 CD52P31358 61 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 PSMC2P35998 433 aaKnown RBP24.67■■□□□ 1.54
ACTN4-210ENST00000588618 MRE11P49959 708 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 PLCB2Q00722 1185 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 SPAG1Q07617 926 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 MCL1Q07820 350 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 KCNJ12Q14500 433 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 MBTPS1Q14703 1052 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 TCP11X2Q5H9J9 407 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 GPD1LQ8N335 351 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 SAAL1Q96ER3 474 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 AGO3Q9H9G7 860 aaKnown RBP24.67■■□□□ 1.54
ACTN4-210ENST00000588618 KIAA1586Q9HCI6 787 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 TBX21Q9UL17 535 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 PADI3Q9ULW8 664 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 SCN5AQ14524 2016 aa24.67■■□□□ 1.54
ACTN4-210ENST00000588618 A0A0B4J269 797 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 GOLGA8IPA6NC78 632 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 GOLGA8JA6NMD2 632 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 SLC16A3O15427 465 aaKnown RBP24.66■■□□□ 1.54
ACTN4-210ENST00000588618 DCAF4L1Q3SXM0 396 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 TWF2Q6IBS0 349 aaKnown RBP24.66■■□□□ 1.54
ACTN4-210ENST00000588618 SLC27A1Q6PCB7 646 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 RDH13Q8NBN7 331 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 CCDC51Q96ER9 411 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 IFIH1Q9BYX4 1025 aaKnown RBP24.66■■□□□ 1.54
ACTN4-210ENST00000588618 PRKAG2Q9UGJ0 569 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 UMODL1Q5DID0 1318 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 TULP1O00294 542 aaPredicted RBP24.66■■□□□ 1.54
ACTN4-210ENST00000588618 FAM189A1O60320 539 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 TPM2P07951 284 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 EEF1GP26641 437 aaKnown RBP24.66■■□□□ 1.54
ACTN4-210ENST00000588618 KRT31Q15323 416 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 ZBTB41Q5SVQ8 909 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 FAM186BQ8IYM0 893 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 TET1Q8NFU7 2136 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 BORCS6Q96GS4 357 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 FAM213AQ9BRX8 229 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 MKNK1Q9BUB5 465 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 CHST12Q9NRB3 414 aa24.66■■□□□ 1.54
ACTN4-210ENST00000588618 EXTL3O43909 919 aa24.65■■□□□ 1.54
ACTN4-210ENST00000588618 ADRB2P07550 413 aa24.65■■□□□ 1.54
ACTN4-210ENST00000588618 MCF2P10911 925 aa24.65■■□□□ 1.54
ACTN4-210ENST00000588618 CCL23P55773 120 aa24.65■■□□□ 1.54
ACTN4-210ENST00000588618 CDT1Q9H211 546 aa24.65■■□□□ 1.54
ACTN4-210ENST00000588618 METTL14Q9HCE5 456 aaKnown RBP24.65■■□□□ 1.54
ACTN4-210ENST00000588618 ERVK-5Q9HDB9 667 aa24.65■■□□□ 1.54
ACTN4-210ENST00000588618 ANK1P16157 1881 aa24.65■■□□□ 1.54
ACTN4-210ENST00000588618 OGTO15294 1046 aa24.64■■□□□ 1.54
ACTN4-210ENST00000588618 SERPINC1P01008 464 aa24.64■■□□□ 1.54
ACTN4-210ENST00000588618 CYP2C18P33260 490 aa24.64■■□□□ 1.54
ACTN4-210ENST00000588618 MTIF2P46199 727 aaKnown RBP24.64■■□□□ 1.54
ACTN4-210ENST00000588618 MARSP56192 900 aaKnown RBP24.64■■□□□ 1.54
ACTN4-210ENST00000588618 FANCCQ00597 558 aa24.64■■□□□ 1.54
ACTN4-210ENST00000588618 SNRNP35Q16560 246 aaKnown RBP24.64■■□□□ 1.54
ACTN4-210ENST00000588618 CBWD2Q8IUF1 395 aa24.64■■□□□ 1.54
ACTN4-210ENST00000588618 FBXL18Q96ME1 805 aa24.64■■□□□ 1.54
ACTN4-210ENST00000588618 HTATIP2Q9BUP3 242 aa24.64■■□□□ 1.54
ACTN4-210ENST00000588618 ARMCX3Q9UH62 379 aaPredicted RBP24.64■■□□□ 1.54
ACTN4-210ENST00000588618 LIMA1Q9UHB6 759 aaKnown RBP24.64■■□□□ 1.54
ACTN4-210ENST00000588618 ZNF233A6NK53 670 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 NPTXRO95502 500 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 RAG1P15918 1043 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 KYAT1Q16773 422 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 SEZ6Q53EL9 994 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 SARM1Q6SZW1 724 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 CRELD2Q6UXH1 353 aaPredicted RBP24.64■■□□□ 1.53
ACTN4-210ENST00000588618 THNSL1Q8IYQ7 743 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 TNS4Q8IZW8 715 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 CEP120Q8N960 986 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 SCLYQ96I15 445 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 TAB2Q9NYJ8 693 aa24.64■■□□□ 1.53
ACTN4-210ENST00000588618 KRT13P13646 458 aa24.63■■□□□ 1.53
ACTN4-210ENST00000588618 ACOT2P49753 483 aa24.63■■□□□ 1.53
ACTN4-210ENST00000588618 GPNMBQ14956 572 aa24.63■■□□□ 1.53
ACTN4-210ENST00000588618 FRMD5Q7Z6J6 570 aa24.63■■□□□ 1.53
ACTN4-210ENST00000588618 USP37Q86T82 979 aa24.63■■□□□ 1.53
ACTN4-210ENST00000588618 NAP1L5Q96NT1 182 aaPredicted RBP24.63■■□□□ 1.53
ACTN4-210ENST00000588618 INTS8Q75QN2 995 aaKnown RBP24.62■■□□□ 1.53
ACTN4-210ENST00000588618 TRIM59Q8IWR1 403 aa24.62■■□□□ 1.53
ACTN4-210ENST00000588618 PLEKHO2Q8TD55 490 aa24.62■■□□□ 1.53
ACTN4-210ENST00000588618 WNT8AQ9H1J5 351 aa24.62■■□□□ 1.53
ACTN4-210ENST00000588618 INTS13Q9NVM9 706 aa24.62■■□□□ 1.53
ACTN4-210ENST00000588618 TRIP11Q15643 1979 aa24.62■■□□□ 1.53
ACTN4-210ENST00000588618 LRRC10BA6NIK2 292 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 PES1O00541 588 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms