RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 DHX38Q92620 1227 aaKnown RBP15.13■□□□□ 0.01
NEDD4L-223ENST00000588516 RNPC3Q96LT9 517 aaKnown RBP15.13■□□□□ 0.01
NEDD4L-223ENST00000588516 ERP44Q9BS26 406 aa15.13■□□□□ 0.01
NEDD4L-223ENST00000588516 UBE2TQ9NPD8 197 aaPredicted RBP15.13■□□□□ 0.01
NEDD4L-223ENST00000588516 CTTNBP2NLQ9P2B4 639 aa15.13■□□□□ 0.01
NEDD4L-223ENST00000588516 UVRAGQ9P2Y5 699 aa15.13■□□□□ 0.01
NEDD4L-223ENST00000588516 PCDHAC2Q9Y5I4 1007 aa15.13■□□□□ 0.01
NEDD4L-223ENST00000588516 RBBP6Q7Z6E9 1792 aaKnown RBP15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 EMSYQ7Z589 1322 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 ESYT3A0FGR9 886 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 DDX3YO15523 660 aaKnown RBP15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 ZC3H11AO75152 810 aaKnown RBP eCLIP15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 MYCP01106 439 aaPredicted RBP15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 KRT14P02533 472 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 LSP1P33241 339 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 MAN1A1P33908 653 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 JAG1P78504 1218 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 IFFO1Q0D2I5 559 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 MAPK7Q13164 816 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 ARHGAP44Q17R89 818 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 TKFCQ3LXA3 575 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 EPC2Q52LR7 807 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 ODF2Q5BJF6 829 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 UBLCP1Q8WVY7 318 aaPredicted RBP15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 P3H4Q92791 437 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 HOOK2Q96ED9 719 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 SLC10A4Q96EP9 437 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 TRIM11Q96F44 468 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 FMO2Q99518 471 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 AP1M1Q9BXS5 423 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 DDX47Q9H0S4 455 aaKnown RBP15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 AGO4Q9HCK5 861 aaKnown RBP15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 KCNH7Q9NS40 1196 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 SAMM50Q9Y512 469 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 FAM169AQ9Y6X4 670 aa15.12■□□□□ 0.01
NEDD4L-223ENST00000588516 GRIN2DO15399 1336 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 CCDC169A6NNP5 214 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 WDR64B1ANS9 1081 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 FOXN3O00409 490 aaPredicted RBP15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 KIAA0391O15091 583 aaKnown RBP15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 ZBED4O75132 1171 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 PHF2O75151 1096 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 PPFIA2O75334 1257 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 FTLP02792 175 aaPredicted RBP15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 INPP5BP32019 993 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 RARRES1P49788 294 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 MXI1P50539 228 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 NCKAP1LP55160 1127 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 BPIFB4P59827 614 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 MRPS25P82663 173 aaKnown RBP15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 ITGB3BPQ13352 177 aaPredicted RBP15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 TNFAIP1Q13829 316 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 RRP1BQ14684 758 aaKnown RBP15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 SLMAPQ14BN4 828 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 PTGISQ16647 500 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 CBWD6Q4V339 395 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 CBWD3Q5JTY5 395 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 CBWD5Q5RIA9 395 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 GJB7Q6PEY0 223 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 HAUS6Q7Z4H7 955 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 TADA2BQ86TJ2 420 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 OTUD6BQ8N6M0 293 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 BANK1Q8NDB2 785 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 LMO3Q8TAP4 145 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 DPF3Q92784 378 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 ZNF333Q96JL9 665 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 GMLQ99445 158 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 HINFPQ9BQA5 517 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 KIAA1586Q9HCI6 787 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 HSPBP1Q9NZL4 362 aa15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 AJAP1Q9UKB5 411 aaPredicted RBP15.11■□□□□ 0.01
NEDD4L-223ENST00000588516 DAPK3O43293 454 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 FAM107AO95990 144 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 TRIM49P0CI25 452 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 TRIM49CP0CI26 452 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 SLURP2P0DP57 97 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 ABCB4P21439 1286 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 CTNNA2P26232 953 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 PPP2R2AP63151 447 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 DHX9Q08211 1270 aaKnown RBP15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 PRPF4BQ13523 1007 aaKnown RBP15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 MTMR1Q13613 665 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 KIAA1755Q5JYT7 1200 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 KRT39Q6A163 491 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 PHLDB3Q6NSJ2 640 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 CEP128Q6ZU80 1094 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 SYDE1Q6ZW31 735 aaPredicted RBP15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 TMC3Q7Z5M5 1100 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 NLRX1Q86UT6 975 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 TAX1BP1Q86VP1 789 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 SPIRE2Q8WWL2 714 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 CENPTQ96BT3 561 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 TRERF1Q96PN7 1200 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 CEP89Q96ST8 783 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 SENP7Q9BQF6 1050 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 GPR88Q9GZN0 384 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 PCYOX1Q9UHG3 505 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 AMACRQ9UHK6 382 aa15.1■□□□□ 0.01
NEDD4L-223ENST00000588516 ALG6Q9Y672 507 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms