RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 YARSP54577 528 aaKnown RBP9.91□□□□□ -0.82
CIRBP-218ENST00000588344 DEFB103AP81534 67 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 HTRA4P83105 476 aaPredicted RBP9.91□□□□□ -0.82
CIRBP-218ENST00000588344 CT47A1Q5JQC4 288 aaPredicted RBP9.91□□□□□ -0.82
CIRBP-218ENST00000588344 CD302Q8IX05 232 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 C12orf56Q8IXR9 622 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 CMTR2Q8IYT2 770 aaKnown RBP9.91□□□□□ -0.82
CIRBP-218ENST00000588344 URGCPQ8TCY9 931 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 GPT2Q8TD30 523 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 POMGNT1Q8WZA1 660 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 ZNF689Q96CS4 500 aaPredicted RBP9.91□□□□□ -0.82
CIRBP-218ENST00000588344 ACAP3Q96P50 834 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 YME1L1Q96TA2 773 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 EIF2AQ9BY44 585 aaKnown RBP9.91□□□□□ -0.82
CIRBP-218ENST00000588344 MRPL9Q9BYD2 267 aaKnown RBP9.91□□□□□ -0.82
CIRBP-218ENST00000588344 TMEM117Q9H0C3 514 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 AGO2Q9UKV8 859 aaKnown RBP9.91□□□□□ -0.82
CIRBP-218ENST00000588344 LOXHD1Q8IVV2 1947 aa9.91□□□□□ -0.82
CIRBP-218ENST00000588344 TTLL13PA6NNM8 815 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 ABLIM1O14639 778 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 INPPL1O15357 1258 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 CALUO43852 315 aaPredicted RBP9.9□□□□□ -0.82
CIRBP-218ENST00000588344 CLTAP09496 248 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 RPL13P26373 211 aaKnown RBP9.9□□□□□ -0.82
CIRBP-218ENST00000588344 CASP5P51878 434 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 CAMK4Q16566 473 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 NFIL3Q16649 462 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 KLHL40Q2TBA0 621 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 CCDC183Q5T5S1 534 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 GPR153Q6NV75 609 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 SLC9A9Q8IVB4 645 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 RNF169Q8NCN4 708 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 KIAA0895Q8NCT3 520 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 SMG8Q8ND04 991 aaKnown RBP9.9□□□□□ -0.82
CIRBP-218ENST00000588344 HPS3Q969F9 1004 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 DHTKD1Q96HY7 919 aaPredicted RBP9.9□□□□□ -0.82
CIRBP-218ENST00000588344 SAMD11Q96NU1 681 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 MSTO1Q9BUK6 570 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 CDT1Q9H211 546 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 RSAD1Q9HA92 442 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 AAASQ9NRG9 546 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 TYW1Q9NV66 732 aaKnown RBP9.9□□□□□ -0.82
CIRBP-218ENST00000588344 ANKFY1Q9P2R3 1169 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 DACH1Q9UI36 760 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 MAN1B1Q9UKM7 699 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 TRAF3IP3Q9Y228 551 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 RWDD3Q9Y3V2 267 aa9.9□□□□□ -0.82
CIRBP-218ENST00000588344 ALPK3Q96L96 1907 aa9.9□□□□□ -0.83
CIRBP-218ENST00000588344 TRIP12Q14669 1992 aaPredicted RBP9.89□□□□□ -0.83
CIRBP-218ENST00000588344 TMEM265A0A087WTH1 108 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 ANKRD63C9JTQ0 380 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 PSMA7O14818 248 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 OFD1O75665 1012 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 EDN1P05305 212 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 ATF7P17544 494 aaPredicted RBP9.89□□□□□ -0.83
CIRBP-218ENST00000588344 KCNA1Q09470 495 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 MORC3Q14149 939 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 BTG3Q14201 252 aaPredicted RBP9.89□□□□□ -0.83
CIRBP-218ENST00000588344 NOMO2Q5JPE7 1267 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 EEF1DP3Q658K8 133 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 CENPPQ6IPU0 288 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 ARMCX5Q6P1M9 558 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 FOXR2Q6PJQ5 311 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 AGMOQ6ZNB7 445 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 ZBTB33Q86T24 672 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 NELFCDQ8IXH7 590 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 FIBCD1Q8N539 461 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 MLKLQ8NB16 471 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
CIRBP-218ENST00000588344 ZBTB45Q96K62 511 aaPredicted RBP9.89□□□□□ -0.83
CIRBP-218ENST00000588344 CASD1Q96PB1 797 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 TSG101Q99816 390 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 KCTD10Q9H3F6 313 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 AGPAT3Q9NRZ7 376 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 SNTG2Q9NY99 539 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 STK39Q9UEW8 545 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 PARP2Q9UGN5 583 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 USP20Q9Y2K6 914 aa9.89□□□□□ -0.83
CIRBP-218ENST00000588344 WDR81Q562E7 1941 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 BICDL2A1A5D9 508 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 ARL5CA6NH57 179 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 ZNF233A6NK53 670 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 TBKBP1A7MCY6 615 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 TGFB1I1O43294 461 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 XPOTO43592 962 aaKnown RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 EXTL3O43909 919 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 FGFR1OPO95684 399 aaKnown RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 RB1P06400 928 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 THP07101 528 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 ADRB2P07550 413 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 ADSSP30520 456 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 HOXD13P35453 343 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 PRCPP42785 496 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 RNASELQ05823 741 aaKnown RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 LRRC63Q05C16 580 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 SURF1Q15526 300 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 EDRF1Q3B7T1 1238 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 XKR4Q5GH76 650 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 SLC39A4Q6P5W5 647 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 SASS6Q6UVJ0 657 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms