RNA–Protein interactions for RNA: ENST00000587623.1

CTDP1-204, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-204ENST00000587623 PLCB3Q01970 1234 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 CACNB1Q02641 598 aaPredicted RBP9.55□□□□□ -0.88
CTDP1-204ENST00000587623 DNM1Q05193 864 aaKnown RBP9.55□□□□□ -0.88
CTDP1-204ENST00000587623 TCEAL5Q5H9L2 206 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 STXBP4Q6ZWJ1 553 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 DYMQ7RTS9 669 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 DAW1Q8N136 415 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 SMG8Q8ND04 991 aaKnown RBP9.55□□□□□ -0.88
CTDP1-204ENST00000587623 CCDC34Q96HJ3 373 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 SPATA32Q96LK8 384 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 REEP2Q9BRK0 252 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 TMEM175Q9BSA9 504 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 COLEC11Q9BWP8 271 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 CCDC113Q9H0I3 377 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 NXF3Q9H4D5 531 aaKnown RBP9.55□□□□□ -0.88
CTDP1-204ENST00000587623 PDZD7Q9H5P4 517 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 IGFLR1Q9H665 355 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 TLE6Q9H808 572 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 BLOC1S4Q9NUP1 217 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 ARHGAP28Q9P2N2 729 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 ANKFY1Q9P2R3 1169 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 SEL1LQ9UBV2 794 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 TNFSF13BQ9Y275 285 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 GDAQ9Y2T3 454 aa9.55□□□□□ -0.88
CTDP1-204ENST00000587623 TTC28Q96AY4 2481 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 GOLGA6L4A6NEF3 574 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 MEIS3P2A8K0S8 358 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 HNRNPDLO14979 420 aaKnown RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 CLDN3O15551 220 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 TRAK2O60296 914 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 BRD1O95696 1058 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 THP07101 528 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 GALTP07902 379 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 MAPTP10636 758 aaKnown RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 MCF2P10911 925 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 SCNN1GP51170 649 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 GRIK3Q13003 919 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 MAPK7Q13164 816 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 GIT2Q14161 759 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 SMC1AQ14683 1233 aaKnown RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 KYAT1Q16773 422 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 ARSHQ5FYA8 562 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 TJAP1Q5JTD0 557 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 NT5DC1Q5TFE4 455 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 PLPP4Q5VZY2 271 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 KIAA1841Q6NSI8 718 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 MPZL3Q6UWV2 235 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 ZPBP2Q6X784 338 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 LRRC55Q6ZSA7 311 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 USP49Q70CQ1 688 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 HAUS6Q7Z4H7 955 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 ZBTB33Q86T24 672 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 CCDC65Q8IXS2 484 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 CEP57L1Q8IYX8 460 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 SLC39A11Q8N1S5 342 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 TMEM161BQ8NDZ6 487 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 DHX58Q96C10 678 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 CDCA3Q99618 268 aaPredicted RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 ACO2Q99798 780 aaKnown RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 TCF25Q9BQ70 676 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 NTPCRQ9BSD7 190 aaKnown RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 TARS2Q9BW92 718 aaKnown RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 SCAND2PQ9GZW5 306 aaPredicted RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 RNF39Q9H2S5 420 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 NRDE2Q9H7Z3 1164 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 UBE2ZQ9H832 354 aaPredicted RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 MRPL44Q9H9J2 332 aaKnown RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 MAGEF1Q9HAY2 307 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 CLDND1Q9NY35 253 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 SNTG2Q9NY99 539 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 KLK14Q9P0G3 267 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 HCSTQ9UBK5 93 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 EXOC7Q9UPT5 735 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 SSX2IPQ9Y2D8 614 aa9.54□□□□□ -0.88
CTDP1-204ENST00000587623 PRG3Q9Y2Y8 225 aaPredicted RBP9.54□□□□□ -0.88
CTDP1-204ENST00000587623 SPDYE4A6NLX3 237 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 NT5C1B-RDH14C9J2C7 533 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 TOM1L1O75674 476 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 RECQL4O94761 1208 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 LINC00271P0C7V0 271 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 KCNA5P22460 613 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 ANP32AP39687 249 aaKnown RBP9.53□□□□□ -0.88
CTDP1-204ENST00000587623 PBX3P40426 434 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 SLC11A1P49279 550 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 NDUFV1P49821 464 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 PKP1Q13835 747 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 NOLC1Q14978 699 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTDP1-204ENST00000587623 PUS10Q3MIT2 529 aaKnown RBP9.53□□□□□ -0.88
CTDP1-204ENST00000587623 HERC4Q5GLZ8 1057 aaPredicted RBP9.53□□□□□ -0.88
CTDP1-204ENST00000587623 EEF1DP3Q658K8 133 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 ELMSAN1Q6PJG2 1045 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 RBM23Q86U06 439 aaKnown RBP9.53□□□□□ -0.88
CTDP1-204ENST00000587623 SYCP3Q8IZU3 236 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 VPS52Q8N1B4 723 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 DDX12PQ92771 950 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 IGSF21Q96ID5 467 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 ZFP42Q96MM3 310 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 ACAP3Q96P50 834 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 TNMDQ9H2S6 317 aa9.53□□□□□ -0.88
CTDP1-204ENST00000587623 RCOR1Q9UKL0 485 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms