RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CNNM3Q8NE01 707 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 FLCNQ8NFG4 579 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 CRYGNQ8WXF5 182 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 BBXQ8WY36 941 aaPredicted RBP8.68□□□□□ -1.02
VMP1-204ENST00000587259 SCLT1Q96NL6 688 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 PPP1R9BQ96SB3 815 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 BPIFA3Q9BQP9 254 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 VN1R3Q9BXE9 311 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 GBP3Q9H0R5 595 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 ELAC1Q9H777 363 aaKnown RBP8.68□□□□□ -1.02
VMP1-204ENST00000587259 MAGEF1Q9HAY2 307 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 KIAA1468Q9P260 1216 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 DNAJB4Q9UDY4 337 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 PUF60Q9UHX1 559 aaKnown RBP8.68□□□□□ -1.02
VMP1-204ENST00000587259 LZTS1Q9Y250 596 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 INPP5FQ9Y2H2 1132 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 SAMM50Q9Y512 469 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 MAFBQ9Y5Q3 323 aaPredicted RBP8.68□□□□□ -1.02
VMP1-204ENST00000587259 COL1A2P08123 1366 aa8.68□□□□□ -1.02
VMP1-204ENST00000587259 PRR23AA6NEV1 266 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 SLC26A4O43511 780 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 NEMFO60524 1076 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 SMC2O95347 1197 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 SRGAP2BP0DMP2 458 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 DARSP14868 501 aaKnown RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 ZSCAN20P17040 1043 aaPredicted RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 EIF4BP23588 611 aaKnown RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 ZNF165P49910 485 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 AFF1P51825 1210 aaKnown RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 PRKCEQ02156 737 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 KRT17Q04695 432 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 PTGDRQ13258 359 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 SMC1AQ14683 1233 aaKnown RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 CT47A1Q5JQC4 288 aaPredicted RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 PDE12Q6L8Q7 609 aaKnown RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 MOXD1Q6UVY6 613 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 DTHD1Q6ZMT9 781 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 KRBA2Q6ZNG9 492 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 ZNF598Q86UK7 904 aaKnown RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 KSR1Q8IVT5 923 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 IQUBQ8NA54 791 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 NLRP7Q8WX94 980 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 CASP10Q92851 521 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 LENG9Q96B70 501 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 PRRX2Q99811 253 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 GTPBP4Q9BZE4 634 aaKnown RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 ADAM7Q9H2U9 754 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 CUEDC2Q9H467 287 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 NGRNQ9NPE2 291 aaKnown RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 DBR1Q9UK59 544 aaKnown RBP8.67□□□□□ -1.02
VMP1-204ENST00000587259 SORCS3Q9UPU3 1222 aa8.67□□□□□ -1.02
VMP1-204ENST00000587259 RIF1Q5UIP0 2472 aaKnown RBP8.66□□□□□ -1.02
VMP1-204ENST00000587259 A0A087WZ62 844 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 BECN2A8MW95 431 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 GOLGA6L6A8MZA4 724 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 NARSO43776 548 aaKnown RBP8.66□□□□□ -1.02
VMP1-204ENST00000587259 OATP04181 439 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 PSAPP07602 524 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 CYP3A4P08684 503 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 OR52Z1P0C646 297 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 HOXB8P17481 243 aaPredicted RBP8.66□□□□□ -1.02
VMP1-204ENST00000587259 ATP2B1P20020 1258 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 MCM7P33993 719 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 MTERF2Q49AM1 385 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 ANO6Q4KMQ2 910 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 CWF19L1Q69YN2 538 aaKnown RBP8.66□□□□□ -1.02
VMP1-204ENST00000587259 PPP4R3AQ6IN85 833 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 CES5AQ6NT32 575 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 ZNF746Q6NUN9 644 aaPredicted RBP8.66□□□□□ -1.02
VMP1-204ENST00000587259 NIPA1Q7RTP0 329 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 ZNF280BQ86YH2 543 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 TDRD5Q8NAT2 981 aaKnown RBP8.66□□□□□ -1.02
VMP1-204ENST00000587259 RNF214Q8ND24 703 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 RSAD2Q8WXG1 361 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 PDLIM2Q96JY6 352 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 MAP7D2Q96T17 732 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 FDXACB1Q9BRP7 624 aaPredicted RBP8.66□□□□□ -1.02
VMP1-204ENST00000587259 ZBP1Q9H171 429 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 UNC45AQ9H3U1 944 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 MFSD1Q9H3U5 465 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 NRDE2Q9H7Z3 1164 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 CCDC39Q9UFE4 941 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 TCEAL9Q9UHQ7 104 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 NR2E1Q9Y466 385 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 PCDHA10Q9Y5I2 948 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 MYH11P35749 1972 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 WDR81Q562E7 1941 aa8.66□□□□□ -1.02
VMP1-204ENST00000587259 A0A0U1RQF3 1178 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 VWA3AA6NCI4 1184 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 SMTNL1A8MU46 457 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 F8W810 466 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 MSH4O15457 936 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 POLR2DO15514 142 aaKnown RBP8.65□□□□□ -1.02
VMP1-204ENST00000587259 CCNT1O60563 726 aaKnown RBP8.65□□□□□ -1.02
VMP1-204ENST00000587259 TPM3P06753 285 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 SLFN14P0C7P3 912 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 NPR3P17342 541 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 PPM1AP35813 382 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 SLC11A1P49279 550 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 ALDH7A1P49419 539 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms