RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 NR1I2O75469 434 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 LARGE1O95461 756 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 NPR3P17342 541 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 GLUD2P49448 558 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 CLCN5P51795 746 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 NUBP1P53384 320 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 DSC1Q08554 894 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 ME3Q16798 604 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 CCDC43Q96MW1 224 aaKnown RBP22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 POLR3FQ9H1D9 316 aaPredicted RBP22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 BRMS1Q9HCU9 246 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 GPRC5CQ9NQ84 441 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 GIT1Q9Y2X7 761 aa22.34■■□□□ 1.17
CLPTM1-204ENST00000585961 GLUD1P00367 558 aa22.33■■□□□ 1.17
CLPTM1-204ENST00000585961 RPL17P18621 184 aaKnown RBP22.33■■□□□ 1.17
CLPTM1-204ENST00000585961 C15orf39Q6ZRI6 1047 aa22.33■■□□□ 1.17
CLPTM1-204ENST00000585961 SIX5Q8N196 739 aa22.33■■□□□ 1.17
CLPTM1-204ENST00000585961 SMG7Q92540 1137 aaKnown RBP22.33■■□□□ 1.17
CLPTM1-204ENST00000585961 PIDD1Q9HB75 910 aa22.33■■□□□ 1.17
CLPTM1-204ENST00000585961 RXFP1Q9HBX9 757 aa22.33■■□□□ 1.17
CLPTM1-204ENST00000585961 JAK2O60674 1132 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 USO1O60763 962 aaKnown RBP22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 TADA2AO75478 443 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 DGAT1O75907 488 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 EFEMP2O95967 443 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 CFHP08603 1231 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 RARRES1P49788 294 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 DSG1Q02413 1049 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 POU5F1BQ06416 359 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 GSTCDQ8NEC7 633 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 RIN2Q8WYP3 895 aaPredicted RBP22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 CCDC51Q96ER9 411 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 MYADMQ96S97 322 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 WDR6Q9NNW5 1121 aaKnown RBP22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 USP20Q9Y2K6 914 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 CFAP54Q96N23 3096 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 CACNA1HO95180 2353 aa22.32■■□□□ 1.16
CLPTM1-204ENST00000585961 LRRIQ4A6NIV6 560 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 LYPLA2O95372 231 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 ANKRD1Q15327 319 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 PCBP1Q15365 356 aaKnown RBP eCLIP22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 CWF19L1Q69YN2 538 aaKnown RBP22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 FRMD5Q7Z6J6 570 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 IFNLR1Q8IU57 520 aaPredicted RBP22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 HACE1Q8IYU2 909 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 RNF168Q8IYW5 571 aaPredicted RBP22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 CMASQ8NFW8 434 aaPredicted RBP22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 MTMR9Q96QG7 549 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 TMEM60Q9H2L4 133 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 POLD4Q9HCU8 107 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 CHST7Q9NS84 486 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 DUSP12Q9UNI6 340 aa22.31■■□□□ 1.16
CLPTM1-204ENST00000585961 TGM5O43548 720 aa22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 NEMFO60524 1076 aa22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 LIG1P18858 919 aa22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 GUCY1B3Q02153 619 aa22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 FUT10Q6P4F1 479 aa22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 SLC27A1Q6PCB7 646 aa22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 DIS3L2Q8IYB7 885 aaKnown RBP22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 HASPINQ8TF76 798 aa22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 ZNF707Q96C28 371 aaPredicted RBP22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 PAAF1Q9BRP4 392 aa22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 NT5C3AQ9H0P0 336 aa22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 PTPRZ1P23471 2315 aaPredicted RBP22.3■■□□□ 1.16
CLPTM1-204ENST00000585961 A0A1B0GUA9 196 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 POTEMA6NI47 508 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 TTLL13PA6NNM8 815 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 SPATA31C1P0DKV0 1188 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 MCM7P33993 719 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 USP41Q3LFD5 358 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 POTEGQ6S5H5 508 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 PRSS55Q6UWB4 352 aaPredicted RBP22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 CEP57Q86XR8 500 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 SLC44A3Q8N4M1 653 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 NSUN7Q8NE18 718 aaKnown RBP22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 CXCL16Q9H2A7 254 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 IGSF9Q9P2J2 1179 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 DPP7Q9UHL4 492 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 ADAM28Q9UKQ2 775 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 CA14Q9ULX7 337 aa22.29■■□□□ 1.16
CLPTM1-204ENST00000585961 MYO15AQ9UKN7 3530 aa22.28■■□□□ 1.16
CLPTM1-204ENST00000585961 PROB1E7EW31 1015 aa22.28■■□□□ 1.16
CLPTM1-204ENST00000585961 TRIM29Q14134 588 aa22.28■■□□□ 1.16
CLPTM1-204ENST00000585961 TMEM132AQ24JP5 1023 aa22.28■■□□□ 1.16
CLPTM1-204ENST00000585961 LILRA6Q6PI73 481 aa22.28■■□□□ 1.16
CLPTM1-204ENST00000585961 ELMSAN1Q6PJG2 1045 aa22.28■■□□□ 1.16
CLPTM1-204ENST00000585961 CATSPER3Q86XQ3 398 aa22.28■■□□□ 1.16
CLPTM1-204ENST00000585961 GTF3C6Q969F1 213 aa22.28■■□□□ 1.16
CLPTM1-204ENST00000585961 CLUHO75153 1309 aa22.28■■□□□ 1.16
CLPTM1-204ENST00000585961 KRBA1A5PL33 1030 aa22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 CASTOR2A6NHX0 329 aa22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 MED24O75448 989 aa22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 XRCC6P12956 609 aaKnown RBP eCLIP22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 AOC1P19801 751 aa22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 NBL1P41271 181 aa22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 DTWD2Q8NBA8 298 aa22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 STAMQ92783 540 aa22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 NFKBIZQ9BYH8 718 aa22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 SNTG2Q9NY99 539 aa22.27■■□□□ 1.16
CLPTM1-204ENST00000585961 NEK4P51957 841 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms