RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 PRIMPOLQ96LW4 560 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 CCDC43Q96MW1 224 aaKnown RBP16.66■□□□□ 0.26
VAPA-209ENST00000585042 PLEKHA4Q9H4M7 779 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 MIOSQ9NXC5 875 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 FNIP2Q9P278 1114 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 CACNA1HO95180 2353 aa16.66■□□□□ 0.26
VAPA-209ENST00000585042 DENND4AQ7Z401 1863 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 CCDC195A0A1B0GUA6 201 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 TEX28O15482 410 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 GLUD1P00367 558 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 MLH1P40692 756 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 TXKP42681 527 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 CREMQ03060 361 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 TAS1R1Q7RTX1 841 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
VAPA-209ENST00000585042 NSUN7Q8NE18 718 aaKnown RBP16.65■□□□□ 0.26
VAPA-209ENST00000585042 MCPH1Q8NEM0 835 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 ASAP3Q8TDY4 903 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 WDR6Q9NNW5 1121 aaKnown RBP16.65■□□□□ 0.26
VAPA-209ENST00000585042 TUFT1Q9NNX1 390 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 MAN1C1Q9NR34 630 aa16.65■□□□□ 0.26
VAPA-209ENST00000585042 PRG3Q9Y2Y8 225 aaPredicted RBP16.65■□□□□ 0.26
VAPA-209ENST00000585042 C2CD2LO14523 706 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 SCNN1GP51170 649 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 ORC2Q13416 577 aaPredicted RBP16.64■□□□□ 0.25
VAPA-209ENST00000585042 FAM187BQ17R55 369 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 USP41Q3LFD5 358 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 NECAB1Q8N987 351 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 GSTCDQ8NEC7 633 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 ZFP42Q96MM3 310 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 NACC1Q96RE7 527 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 KCNK12Q9HB15 430 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 PRMT7Q9NVM4 692 aaPredicted RBP16.64■□□□□ 0.25
VAPA-209ENST00000585042 HES2Q9Y543 173 aa16.64■□□□□ 0.25
VAPA-209ENST00000585042 TDRD15B5MCY1 1934 aaKnown RBP16.63■□□□□ 0.25
VAPA-209ENST00000585042 H0Y858 1186 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 SPATA31C1P0DKV0 1188 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 MUTP22033 750 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 GRIK3Q13003 919 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 TMEM105Q8N8V8 129 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 PIGOQ8TEQ8 1089 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 POLR3CQ9BUI4 534 aaPredicted RBP16.63■□□□□ 0.25
VAPA-209ENST00000585042 POLR3FQ9H1D9 316 aaPredicted RBP16.63■□□□□ 0.25
VAPA-209ENST00000585042 C2orf40Q9H1Z8 148 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 FZD8Q9H461 694 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 ZDHHC7Q9NXF8 308 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 ADAM28Q9UKQ2 775 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 DUSP12Q9UNI6 340 aa16.63■□□□□ 0.25
VAPA-209ENST00000585042 GFRA3O60609 400 aa16.62■□□□□ 0.25
VAPA-209ENST00000585042 NEK4P51957 841 aa16.62■□□□□ 0.25
VAPA-209ENST00000585042 SAFBQ15424 915 aaKnown RBP eCLIP16.62■□□□□ 0.25
VAPA-209ENST00000585042 CDCA2Q69YH5 1023 aaPredicted RBP16.62■□□□□ 0.25
VAPA-209ENST00000585042 FUT10Q6P4F1 479 aa16.62■□□□□ 0.25
VAPA-209ENST00000585042 LILRA6Q6PI73 481 aa16.62■□□□□ 0.25
VAPA-209ENST00000585042 CATSPER3Q86XQ3 398 aa16.62■□□□□ 0.25
VAPA-209ENST00000585042 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
VAPA-209ENST00000585042 SMOC2Q9H3U7 446 aa16.62■□□□□ 0.25
VAPA-209ENST00000585042 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
VAPA-209ENST00000585042 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.62■□□□□ 0.25
VAPA-209ENST00000585042 EPS15L1Q9UBC2 864 aa16.62■□□□□ 0.25
VAPA-209ENST00000585042 WNT16Q9UBV4 365 aa16.62■□□□□ 0.25
VAPA-209ENST00000585042 MTCL1Q9Y4B5 1905 aaKnown RBP16.61■□□□□ 0.25
VAPA-209ENST00000585042 C2orf16Q68DN1 1984 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 B4GALT5O43286 388 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 DTNBO60941 627 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 TADA2AO75478 443 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 NPTXRO95502 500 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 ATP2B1P20020 1258 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 AKAP5P24588 427 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 RPA1P27694 616 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 NBL1P41271 181 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 ZBTB8OSQ8IWT0 167 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 ERMNQ8TAM6 284 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 APOL6Q9BWW8 343 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 GPR62Q9BZJ7 368 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 NT5C3AQ9H0P0 336 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 PARP2Q9UGN5 583 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 USP34Q70CQ2 3546 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 CLUHO75153 1309 aa16.61■□□□□ 0.25
VAPA-209ENST00000585042 ZFHX2Q9C0A1 2572 aaPredicted RBP16.6■□□□□ 0.25
VAPA-209ENST00000585042 LRRIQ4A6NIV6 560 aa16.6■□□□□ 0.25
VAPA-209ENST00000585042 N4BP3O15049 544 aa16.6■□□□□ 0.25
VAPA-209ENST00000585042 USO1O60763 962 aaKnown RBP16.6■□□□□ 0.25
VAPA-209ENST00000585042 LARGE1O95461 756 aa16.6■□□□□ 0.25
VAPA-209ENST00000585042 AOC1P19801 751 aa16.6■□□□□ 0.25
VAPA-209ENST00000585042 TUSC3Q13454 348 aa16.6■□□□□ 0.25
VAPA-209ENST00000585042 FEZF2Q8TBJ5 459 aa16.6■□□□□ 0.25
VAPA-209ENST00000585042 SMG7Q92540 1137 aaKnown RBP16.6■□□□□ 0.25
VAPA-209ENST00000585042 ZNF707Q96C28 371 aaPredicted RBP16.6■□□□□ 0.25
VAPA-209ENST00000585042 PRKD2Q9BZL6 878 aa16.6■□□□□ 0.25
VAPA-209ENST00000585042 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
VAPA-209ENST00000585042 FAM86C1Q9NVL1 165 aa16.6■□□□□ 0.25
VAPA-209ENST00000585042 ZFP37Q9Y6Q3 630 aaPredicted RBP16.6■□□□□ 0.25
VAPA-209ENST00000585042 SF3B1O75533 1304 aaKnown RBP eCLIP16.6■□□□□ 0.258e-10■■■■■ 31
VAPA-209ENST00000585042 POTEMA6NI47 508 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 WNT7AO00755 349 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 TGM5O43548 720 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 JAK2O60674 1132 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms