RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 FGFR4P22455 802 aa18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 MATR3P43243 847 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 CASP4P49662 377 aa18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 TLE2Q04725 743 aa18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 KRT31Q15323 416 aa18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ZBTB45Q96K62 511 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ADPGKQ9BRR6 497 aa18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 NOC4LQ9BVI4 516 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 PCIF1Q9H4Z3 704 aa18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ERVK-5Q9HDB9 667 aa18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ARMCX3Q9UH62 379 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 TBX21Q9UL17 535 aa18.24■□□□□ 0.51
CDK5RAP3-230ENST00000584042 GPR182O15218 404 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 FAM189A1O60320 539 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 SERPINC1P01008 464 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ADRB2P07550 413 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 TPM2P07951 284 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 GHRP10912 638 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 HOXA11P31270 313 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 MTIF2P46199 727 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 PPP2R3AQ06190 1150 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 FAAP100Q0VG06 881 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 PAK2Q13177 524 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 LPIN1Q14693 890 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 SNRNP35Q16560 246 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 MAN2A1Q16706 1144 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 LRRC26Q2I0M4 334 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 SLC27A1Q6PCB7 646 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 FAM43BQ6ZT52 329 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 INTS8Q75QN2 995 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 TRIM59Q8IWR1 403 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 SAAL1Q96ER3 474 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 BORCS6Q96GS4 357 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 CPB2Q96IY4 423 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 TCHPQ9BT92 498 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 PIN4Q9Y237 131 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ATP11BQ9Y2G3 1177 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ALPK3Q96L96 1907 aa18.23■□□□□ 0.51
CDK5RAP3-230ENST00000584042 A0A1B0GTH6 734 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 LRRC10BA6NIK2 292 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 CBFA2T2O43439 604 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 PARNO95453 639 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 CLTBP09497 229 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 HARSP12081 509 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 COPB1P53618 953 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 MCCD1P59942 119 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 POU5F1Q01860 360 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 KYAT1Q16773 422 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 CBWD2Q8IUF1 395 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 TUBGCP2Q9BSJ2 902 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 TAB2Q9NYJ8 693 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ST3GAL5Q9UNP4 418 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ANK1P16157 1881 aa18.22■□□□□ 0.51
CDK5RAP3-230ENST00000584042 LGALS16A8MUM7 142 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 AP5Z1O43299 807 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 TPM3P06753 285 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 KRT13P13646 458 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 PRKCSHP14314 528 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 EN2P19622 333 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 CYP24A1Q07973 514 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 BFSP1Q12934 665 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 MBTPS1Q14703 1052 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 FILIP1LQ4L180 1135 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ZBTB33Q86T24 672 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 USP37Q86T82 979 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 BRSK2Q8IWQ3 736 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 ZSWIM2Q8NEG5 633 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 FAM213AQ9BRX8 229 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 HIPK3Q9H422 1215 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 AGO3Q9H9G7 860 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 CHST12Q9NRB3 414 aa18.21■□□□□ 0.51
CDK5RAP3-230ENST00000584042 CITO14578 2027 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 GOLGA8IPA6NC78 632 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ZNF233A6NK53 670 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 GOLGA8JA6NMD2 632 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 PLCB2Q00722 1185 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CRELD2Q6UXH1 353 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CDR2LQ86X02 465 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TMC2Q8TDI7 906 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 MRFAP1L1Q96HT8 127 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 MFSD14AQ96MC6 490 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TRIM5Q9C035 493 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 IFNKQ9P0W0 207 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CPSF3Q9UKF6 684 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 PADI3Q9ULW8 664 aa18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDK5RAP3-230ENST00000584042 NPTXRO95502 500 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CD52P31358 61 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 GRM5P41594 1212 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 UBASH3AP57075 661 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 NFX1Q12986 1120 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 PDCD11Q14690 1871 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 VWA3BQ502W6 1294 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 DCAF17Q5H9S7 520 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 MIIPQ5JXC2 388 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ZBTB41Q5SVQ8 909 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CREBRFQ8IUR6 639 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 SLC35C1Q96A29 364 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TRAIPQ9BWF2 469 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 XPO4Q9C0E2 1151 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms