RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 PUF60Q9UHX1 559 aaKnown RBP27.41■■□□□ 1.98
TSEN54-209ENST00000583454 A0A087X0B3 334 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 MEIS3P2A8K0S8 358 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 TSPAN1O60635 241 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 ME1P48163 572 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 FAM187BQ17R55 369 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 SYCE2Q6PIF2 218 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 PPP4R3CPQ6ZMV5 832 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 HFE2Q6ZVN8 426 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 GPBP1Q86WP2 473 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 ZBTB8OSQ8IWT0 167 aa27.4■■□□□ 1.98
TSEN54-209ENST00000583454 LEO1Q8WVC0 666 aaPredicted RBP27.4■■□□□ 1.98
TSEN54-209ENST00000583454 ERLIN2O94905 339 aa27.39■■□□□ 1.98
TSEN54-209ENST00000583454 AXLP30530 894 aa27.39■■□□□ 1.98
TSEN54-209ENST00000583454 RAD51AP2Q09MP3 1159 aa27.39■■□□□ 1.98
TSEN54-209ENST00000583454 ANKRD54Q6NXT1 300 aa27.39■■□□□ 1.98
TSEN54-209ENST00000583454 TMEM173Q86WV6 379 aaPredicted RBP27.39■■□□□ 1.98
TSEN54-209ENST00000583454 LPPQ93052 612 aa27.39■■□□□ 1.98
TSEN54-209ENST00000583454 NTPCRQ9BSD7 190 aaKnown RBP27.39■■□□□ 1.98
TSEN54-209ENST00000583454 PHF7Q9BWX1 381 aaPredicted RBP27.39■■□□□ 1.98
TSEN54-209ENST00000583454 MRPL9Q9BYD2 267 aaKnown RBP27.39■■□□□ 1.98
TSEN54-209ENST00000583454 PANK2Q9BZ23 570 aa27.39■■□□□ 1.98
TSEN54-209ENST00000583454 CCDC113Q9H0I3 377 aa27.39■■□□□ 1.98
TSEN54-209ENST00000583454 NPHP3-ACAD11A0A0J9YXS1 232 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 ZNF623O75123 536 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 NPTX2P47972 431 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 EFNA5P52803 228 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 PEX3P56589 373 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 BCAR1P56945 870 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 DHX8Q14562 1220 aaKnown RBP27.38■■□□□ 1.97
TSEN54-209ENST00000583454 TWF2Q6IBS0 349 aaKnown RBP27.38■■□□□ 1.97
TSEN54-209ENST00000583454 DEPTORQ8TB45 409 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 EDAQ92838 391 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 PRIMPOLQ96LW4 560 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 PRMT7Q9NVM4 692 aaPredicted RBP27.38■■□□□ 1.97
TSEN54-209ENST00000583454 KCNG1Q9UIX4 513 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 ODF2LQ9ULJ1 636 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 ZDBF2Q9HCK1 2354 aa27.38■■□□□ 1.97
TSEN54-209ENST00000583454 C2orf71A6NGG8 1288 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 SFI1A8K8P3 1242 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 NT5C1B-RDH14C9J2C7 533 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 NCLP19338 710 aaKnown RBP27.37■■□□□ 1.97
TSEN54-209ENST00000583454 ANP32AP39687 249 aaKnown RBP27.37■■□□□ 1.97
TSEN54-209ENST00000583454 KRT17Q04695 432 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 NCBP1Q09161 790 aaKnown RBP27.37■■□□□ 1.97
TSEN54-209ENST00000583454 DMP1Q13316 513 aaPredicted RBP27.37■■□□□ 1.97
TSEN54-209ENST00000583454 UBXN11Q5T124 520 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 TMC7Q7Z402 723 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 MRPL43Q8N983 215 aaKnown RBP27.37■■□□□ 1.97
TSEN54-209ENST00000583454 SPIRE2Q8WWL2 714 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 CCDC51Q96ER9 411 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 SPATA32Q96LK8 384 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 REEP2Q9BRK0 252 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 KIFC3Q9BVG8 833 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 SCAND2PQ9GZW5 306 aaPredicted RBP27.37■■□□□ 1.97
TSEN54-209ENST00000583454 FAM105AQ9NUU6 356 aa27.37■■□□□ 1.97
TSEN54-209ENST00000583454 SKIP12755 728 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 PLS3P13797 630 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 ARF4P18085 180 aaPredicted RBP27.36■■□□□ 1.97
TSEN54-209ENST00000583454 STAT6P42226 847 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 RAB27AP51159 221 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 GIT2Q14161 759 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 E2F4Q16254 413 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 MAPK6Q16659 721 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 RESP18Q5W5W9 173 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 LLGL2Q6P1M3 1020 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 NOTUMQ6P988 496 aa27.36■■□□□ 1.97
TSEN54-209ENST00000583454 BCL7CQ8WUZ0 217 aaPredicted RBP27.36■■□□□ 1.97
TSEN54-209ENST00000583454 RBM19Q9Y4C8 960 aaKnown RBP27.36■■□□□ 1.97
TSEN54-209ENST00000583454 A0A1B0GUA9 196 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 CCDC169A6NNP5 214 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 ACKR2O00590 384 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 B4GALT5O43286 388 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 B4GALT3O60512 393 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 ZNF131P52739 623 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 LONRF3Q496Y0 759 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 SV2BQ7L1I2 683 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 MRPL10Q7Z7H8 261 aaKnown RBP27.35■■□□□ 1.97
TSEN54-209ENST00000583454 PDILTQ8N807 584 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 RSPH1Q8WYR4 309 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 TBC1D13Q9NVG8 400 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 ARHGAP28Q9P2N2 729 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 CIZ1Q9ULV3 898 aaPredicted RBP27.35■■□□□ 1.97
TSEN54-209ENST00000583454 PCDHB2Q9Y5E7 798 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 KMT2EQ8IZD2 1858 aa27.35■■□□□ 1.97
TSEN54-209ENST00000583454 OFD1O75665 1012 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 CACNB1Q02641 598 aaPredicted RBP27.34■■□□□ 1.97
TSEN54-209ENST00000583454 SMC1AQ14683 1233 aaKnown RBP27.34■■□□□ 1.97
TSEN54-209ENST00000583454 ADALQ6DHV7 355 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 CPB2Q96IY4 423 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 RPGRIP1Q96KN7 1286 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 TMEM134Q9H6X4 195 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 NRDE2Q9H7Z3 1164 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 KMT5AQ9NQR1 393 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 LARSQ9P2J5 1176 aaKnown RBP27.34■■□□□ 1.97
TSEN54-209ENST00000583454 CDH22Q9UJ99 828 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 HCFC2Q9Y5Z7 792 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 CNTNAP2Q9UHC6 1331 aa27.34■■□□□ 1.97
TSEN54-209ENST00000583454 PRKCBP05771 671 aa27.33■■□□□ 1.97
TSEN54-209ENST00000583454 ALDH7A1P49419 539 aaKnown RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms