RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 COL4A3Q01955 1670 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 DOCK8Q8NF50 2099 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 NRCAMQ92823 1304 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 IGSF9BQ9UPX0 1349 aa9.03□□□□□ -0.96
PPP4R1-225ENST00000583438 A0A1W2PP55 124 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 PER2O15055 1255 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 SGSM2O43147 1006 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 GHRHP01286 108 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 EDN3P14138 238 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 INSRRP14616 1297 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 ALAS2P22557 587 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 NRIP1P48552 1158 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 ERVFC1P60507 584 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 BTG3Q14201 252 aaPredicted RBP9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 PLCB4Q15147 1175 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 RBM23Q86U06 439 aaKnown RBP9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 SAMD3Q8N6K7 520 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 FBF1Q8TES7 1133 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 POF1BQ8WVV4 589 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 APBB2Q92870 758 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 DUSP9Q99956 384 aaKnown RBP9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 C11orf84Q9BUA3 381 aaPredicted RBP9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 RASSF4Q9H2L5 321 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 CD207Q9UJ71 328 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 PADI3Q9ULW8 664 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 USP15Q9Y4E8 981 aaPredicted RBP9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 CNTNAP5Q8WYK1 1306 aa9.02□□□□□ -0.97
PPP4R1-225ENST00000583438 DNAH14Q0VDD8 3507 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 DMXL1Q9Y485 3027 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 STXBP3O00186 592 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 SH2B2O14492 632 aaPredicted RBP9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 EDIL3O43854 480 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 RB1P06400 928 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 PBX3P40426 434 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 NT5C2P49902 561 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 APOBRQ0VD83 1088 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 COASYQ13057 564 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 CBX2Q14781 532 aaPredicted RBP9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 GNPTABQ3T906 1256 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 FAM102BQ5T8I3 360 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 PSAPL1Q6NUJ1 521 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 LRRC55Q6ZSA7 311 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 CMTR2Q8IYT2 770 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 EFHBQ8N7U6 833 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 ATP8B4Q8TF62 1192 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 SUSD6Q92537 303 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 EDAQ92838 391 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 GPRASP2Q96D09 838 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 BTBD6Q96KE9 485 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 SPACA7Q96KW9 195 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 HHIPQ96QV1 700 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 PPP1R16BQ96T49 567 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 LMAN2LQ9H0V9 348 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 ERVK-5Q9HDB9 667 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 DZANK1Q9NVP4 752 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 TMEM260Q9NX78 707 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 CTNNA3Q9UI47 895 aa9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 ZNF215Q9UL58 517 aaPredicted RBP9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 RBM8AQ9Y5S9 174 aaKnown RBP9.01□□□□□ -0.97
PPP4R1-225ENST00000583438 TMEM221A6NGB7 291 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 M0R296 226 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 FSCN2O14926 492 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 STAM2O75886 525 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 FGFR1P11362 822 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 IBSPP21815 317 aaPredicted RBP9□□□□□ -0.97
PPP4R1-225ENST00000583438 SP100P23497 879 aaPredicted RBP9□□□□□ -0.97
PPP4R1-225ENST00000583438 NDUFV1P49821 464 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 ZXDAP98168 799 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 WWC2Q6AWC2 1192 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 TAF2Q6P1X5 1199 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 SYCE2Q6PIF2 218 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 C20orf204Q6ZNR8 217 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 CHSY3Q70JA7 882 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 CCDC60Q8IWA6 550 aaPredicted RBP9□□□□□ -0.97
PPP4R1-225ENST00000583438 SMARCC2Q8TAQ2 1214 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 SEPT1Q8WYJ6 367 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 MAP4K1Q92918 833 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 P2RX5Q93086 422 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 PLD4Q96BZ4 506 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 OSMRQ99650 979 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 LSG1Q9H089 658 aaKnown RBP9□□□□□ -0.97
PPP4R1-225ENST00000583438 SMG9Q9H0W8 520 aaKnown RBP9□□□□□ -0.97
PPP4R1-225ENST00000583438 S1PR5Q9H228 398 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 CWH43Q9H720 699 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 JADE2Q9NQC1 790 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 ERAP1Q9NZ08 941 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 PARP2Q9UGN5 583 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 PCDHA6Q9UN73 950 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 NOC2LQ9Y3T9 749 aaKnown RBP9□□□□□ -0.97
PPP4R1-225ENST00000583438 PCDHA8Q9Y5H6 950 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 TRPV2Q9Y5S1 764 aa9□□□□□ -0.97
PPP4R1-225ENST00000583438 RIF1Q5UIP0 2472 aaKnown RBP8.99□□□□□ -0.97
PPP4R1-225ENST00000583438 FAM186AA6NE01 2351 aa8.99□□□□□ -0.97
PPP4R1-225ENST00000583438 FANCMQ8IYD8 2048 aa8.99□□□□□ -0.97
PPP4R1-225ENST00000583438 GVINP1Q7Z2Y8 2422 aa8.99□□□□□ -0.97
PPP4R1-225ENST00000583438 IGKV6D-21A0A0A0MT36 114 aa8.99□□□□□ -0.97
PPP4R1-225ENST00000583438 HIDE1A8MVS5 230 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms