RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	PSMC3	P17980	439 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	CTH	P32929	405 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	IL15	P40933	162 aa	Predicted RBP	5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	PROX2	Q3B8N5	592 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	USP39	Q53GS9	565 aa	Known RBP	5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	CELF3	Q5SZQ8	465 aa	Known RBP	5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	IER5	Q5VY09	327 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	LILRA6	Q6PI73	481 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	TXNDC11	Q6PKC3	985 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	SEPT14	Q6ZU15	432 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	OR2I1P	Q8NGU4	316 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	DEPDC1B	Q8WUY9	529 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	MIB2	Q96AX9	1013 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	XAGE2	Q96GT9	111 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	RPS6KC1	Q96S38	1066 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	TTPAL	Q9BTX7	342 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	AVEN	Q9NQS1	362 aa	Predicted RBP	5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	TRPV2	Q9Y5S1	764 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	TG	P01266	2768 aa		5.86	□□□□□ -1.47
MSI2-216	ENST00000582772	CCDC171	Q6TFL3	1326 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	ANO9	A1A5B4	782 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772		A1L4Q6	167 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	DENND3	A2RUS2	1198 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	SPECC1L-ADORA2A	F8WAN1	911 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	SYNCRIP	O60506	623 aa	Known RBP	5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	CLDN1	O95832	211 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	CFI	P05156	583 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	PRF1	P14222	555 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	RASA1	P20936	1047 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	PTGER3	P43115	390 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	EPHA5	P54756	1037 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	RPS6	P62753	249 aa	Known RBP	5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	NTHL1	P78549	312 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	GRM2	Q14416	872 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	NBR1	Q14596	966 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	NCAPH	Q15003	741 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	SMTNL2	Q2TAL5	461 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	CLLU1OS	Q5K130	101 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	TTC39A	Q5SRH9	613 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	RNF207	Q6ZRF8	634 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	LPCAT2	Q7L5N7	544 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	SYT13	Q7L8C5	426 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	VSIG10L	Q86VR7	867 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	RASSF3	Q86WH2	238 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	DHX40	Q8IX18	779 aa	Known RBP	5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	GPR65	Q8IYL9	337 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	ABI1	Q8IZP0	508 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	MIER1	Q8N108	512 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	CACTIN-AS1	Q8N1I8	211 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	OLIG1	Q8TAK6	271 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	CHURC1	Q8WUH1	139 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	DNAJB3	Q8WWF6	145 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	MKL1	Q969V6	931 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	CLUAP1	Q96AJ1	413 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	SPATA33	Q96N06	139 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	ZNF578	Q96N58	590 aa	Predicted RBP	5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	MBOAT7	Q96N66	472 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	HHIP	Q96QV1	700 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	APOL6	Q9BWW8	343 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	FSCN3	Q9NQT6	498 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	CCPG1	Q9ULG6	757 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	DOCK5	Q9H7D0	1870 aa		5.85	□□□□□ -1.47
MSI2-216	ENST00000582772	MXRA5	Q9NR99	2828 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	WDR19	Q8NEZ3	1342 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772		F6X3S4	739 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	FLRT2	O43155	660 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	TGM5	O43548	720 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	TNFSF14	O43557	240 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	DXO	O77932	396 aa	Known RBP	5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	EFEMP2	O95967	443 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	LRG1	P02750	347 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	CDK4	P11802	303 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	CALML3	P27482	149 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	GDI1	P31150	447 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	FXR2	P51116	673 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	RARS	P54136	660 aa	Known RBP	5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	TIMM10	P62072	90 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	MYO1E	Q12965	1108 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	DSC3	Q14574	896 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	USH1G	Q495M9	461 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	ODR4	Q5SWX8	454 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	LYSMD4	Q5XG99	296 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	VIT	Q6UXI7	678 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	C16orf86	Q6ZW13	317 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	RNF168	Q8IYW5	571 aa	Predicted RBP	5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	ZNF564	Q8TBZ8	553 aa	Predicted RBP	5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	STAG1	Q8WVM7	1258 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	KCNE4	Q8WWG9	221 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	CLEC4D	Q8WXI8	215 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	FAM20A	Q96MK3	541 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	IWS1	Q96ST2	819 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	RIOK1	Q9BRS2	568 aa	Known RBP	5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	ZDHHC5	Q9C0B5	715 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	SLC25A18	Q9H1K4	315 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	ZFP14	Q9HCL3	533 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	MCM9	Q9NXL9	1143 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	TUBE1	Q9UJT0	475 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	ANAPC2	Q9UJX6	822 aa		5.84	□□□□□ -1.47
MSI2-216	ENST00000582772	PCDHGB2	Q9Y5G2	931 aa		5.84	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms