RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 SEMA4DQ92854 862 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 MSTO1Q9BUK6 570 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 TSGA10Q9BZW7 698 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 CCDC113Q9H0I3 377 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 TUT1Q9H6E5 874 aaKnown RBP12.14□□□□□ -0.47
GGA3-213ENST00000582486 ZFYVE28Q9HCC9 887 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 KIAA1586Q9HCI6 787 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 TMEM8AQ9HCN3 771 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 ABT1Q9ULW3 272 aaKnown RBP12.14□□□□□ -0.47
GGA3-213ENST00000582486 EVPLQ92817 2033 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 SIP14410 1827 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 A0A0B4J269 797 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 CTAGE9A4FU28 777 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 MMP3P08254 477 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 HOXC6P09630 235 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 CYP2B6P20813 491 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 KLRC1P26715 233 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 WNT7BP56706 349 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 CRHR2Q13324 411 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 MAPK6Q16659 721 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 ZBTB41Q5SVQ8 909 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 SV2AQ7L0J3 742 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 ZBTB8OSQ8IWT0 167 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 LRRN4CLQ8ND94 238 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 FAM84AQ96KN4 292 aa12.14□□□□□ -0.47
GGA3-213ENST00000582486 FOXN3O00409 490 aaPredicted RBP12.13□□□□□ -0.47
GGA3-213ENST00000582486 KIAA0391O15091 583 aaKnown RBP12.13□□□□□ -0.47
GGA3-213ENST00000582486 CLDN3O15551 220 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 DYNC1LI2O43237 492 aaPredicted RBP12.13□□□□□ -0.47
GGA3-213ENST00000582486 PRKCBP05771 671 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 HARSP12081 509 aaKnown RBP12.13□□□□□ -0.47
GGA3-213ENST00000582486 FERP16591 822 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 GTF2H1P32780 548 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 CYP2C19P33261 490 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 GRM1Q13255 1194 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 NAA30Q147X3 362 aaPredicted RBP12.13□□□□□ -0.47
GGA3-213ENST00000582486 DGKDQ16760 1214 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 SEZ6Q53EL9 994 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 LMBRD2Q68DH5 695 aaPredicted RBP12.13□□□□□ -0.47
GGA3-213ENST00000582486 ZPBP2Q6X784 338 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 TAS1R2Q8TE23 839 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 USP6NLQ92738 828 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 NAPGQ99747 312 aaPredicted RBP12.13□□□□□ -0.47
GGA3-213ENST00000582486 MRPL4Q9BYD3 311 aaKnown RBP12.13□□□□□ -0.47
GGA3-213ENST00000582486 COQ4Q9Y3A0 265 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 MRFAP1Q9Y605 127 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 ZNF236Q9UL36 1845 aa12.13□□□□□ -0.47
GGA3-213ENST00000582486 PJA2O43164 708 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 LDHAP00338 332 aaKnown RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 HOXD8P13378 290 aaPredicted RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 RFX1P22670 979 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 SREBF2Q12772 1141 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 PSMD6Q15008 389 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 FBXL13Q8NEE6 735 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 ZNF516Q92618 1163 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 SECISBP2LQ93073 1101 aaKnown RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 FNBP1Q96RU3 617 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 ACO2Q99798 780 aaKnown RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 TCHPQ9BT92 498 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 C2orf40Q9H1Z8 148 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 GPBP1L1Q9HC44 474 aaPredicted RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 PDE11AQ9HCR9 933 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 RAB20Q9NX57 234 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 SALL4Q9UJQ4 1053 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 GJD2Q9UKL4 321 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 DAAM1Q9Y4D1 1078 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 INO80B-WBP1J3KQ70 363 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 ENC1O14682 589 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 TOM1L1O75674 476 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 ZNF865P0CJ78 1059 aaPredicted RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 TNNI1P19237 187 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 GPC3P51654 580 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 ENPEPQ07075 957 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 TFDP1Q14186 410 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 ZBTB33Q86T24 672 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 KAT5Q92993 513 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 ELMO3Q96BJ8 720 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 LENG1Q96BZ8 264 aaPredicted RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 PPP1R16BQ96T49 567 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 INO80BQ9C086 356 aaPredicted RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 MINDY3Q9H8M7 445 aa12.12□□□□□ -0.47
GGA3-213ENST00000582486 RBAKQ9NYW8 714 aaPredicted RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.12□□□□□ -0.479e-6■■□□□ 14.3
GGA3-213ENST00000582486 GNEQ9Y223 722 aaKnown RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 V9GYY5 206 aaPredicted RBP12.12□□□□□ -0.47
GGA3-213ENST00000582486 TNPO2O14787 897 aaKnown RBP12.11□□□□□ -0.47
GGA3-213ENST00000582486 MAGEB2O15479 319 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 ASAP2O43150 1006 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 CTGFP29279 349 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 PTENP60484 403 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 CLDN10P78369 228 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 OLFML2BQ68BL8 750 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 PPM1KQ8N3J5 372 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 LINC01465Q8N7H1 131 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 ERO1AQ96HE7 468 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 CARD6Q9BX69 1037 aa12.11□□□□□ -0.47
GGA3-213ENST00000582486 PACSIN1Q9BY11 444 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms