RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 MBTD1Q05BQ5 628 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 TMEM62Q0P6H9 643 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 FAM187BQ17R55 369 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 KMT5BQ4FZB7 885 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 COBLL1Q53SF7 1204 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 FBXO47Q5MNV8 452 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 STXBP4Q6ZWJ1 553 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 ZNF720Q7Z2F6 126 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 SCLT1Q96NL6 688 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 OSMRQ99650 979 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 STRA6Q9BX79 667 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 CCDC113Q9H0I3 377 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 NSUN3Q9H649 340 aaKnown RBP13.34□□□□□ -0.27
CCDC84-209ENST00000580556 MRPL44Q9H9J2 332 aaKnown RBP13.34□□□□□ -0.27
CCDC84-209ENST00000580556 POLD4Q9HCU8 107 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 FAM86C1Q9NVL1 165 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 UBE4BO95155 1302 aa13.34□□□□□ -0.27
CCDC84-209ENST00000580556 K7ENM7 598 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 MBTPS2O43462 519 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 EFCAB14O75071 495 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 UPP2O95045 317 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 CSPG5O95196 566 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 AMHP03971 560 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 SFPQP23246 707 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCDC84-209ENST00000580556 GTF2F1P35269 517 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCDC84-209ENST00000580556 GTF2BQ00403 316 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 TCF15Q12870 199 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 BMT2Q1RMZ1 405 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 CAVIN1Q6NZI2 390 aaKnown RBP13.33□□□□□ -0.28
CCDC84-209ENST00000580556 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 TSHZ1Q6ZSZ6 1077 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.28
CCDC84-209ENST00000580556 HAUS6Q7Z4H7 955 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 TMEM192Q8IY95 271 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 TMEM40Q8WWA1 233 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 FZD8Q9H461 694 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 CDHR5Q9HBB8 845 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 PRMT7Q9NVM4 692 aaPredicted RBP13.33□□□□□ -0.28
CCDC84-209ENST00000580556 TMEM63CQ9P1W3 806 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
CCDC84-209ENST00000580556 MYH11P35749 1972 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 DENND3A2RUS2 1198 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 SLC16A4O15374 487 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 LETM1O95202 739 aaPredicted RBP13.32□□□□□ -0.28
CCDC84-209ENST00000580556 LPIN1Q14693 890 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 SMAD2Q15796 467 aaKnown RBP13.32□□□□□ -0.28
CCDC84-209ENST00000580556 MAPK6Q16659 721 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 ZNF658Q5TYW1 1059 aaPredicted RBP13.32□□□□□ -0.28
CCDC84-209ENST00000580556 MAP4K3Q8IVH8 894 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 KIAA0895Q8NCT3 520 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 PPP1R16BQ96T49 567 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 KIFC3Q9BVG8 833 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 MINDY3Q9H8M7 445 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 MAN1B1Q9UKM7 699 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 TBX20Q9UMR3 447 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 FAM50BQ9Y247 325 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 GINS2Q9Y248 185 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 CNTNAP2Q9UHC6 1331 aa13.32□□□□□ -0.28
CCDC84-209ENST00000580556 INO80B-WBP1J3KQ70 363 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 K7ERI5 159 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 ACKR2O00590 384 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 GPR182O15218 404 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 LINC01565O15544 149 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 TBX10O75333 385 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 RPS6KA5O75582 802 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 KIF20AO95235 890 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 GCNT3O95395 438 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 PIGRP01833 764 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 NMT1P30419 496 aaKnown RBP13.31□□□□□ -0.28
CCDC84-209ENST00000580556 AXLP30530 894 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 PPP1R2P41236 205 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 PTPN5P54829 565 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 HYAL1Q12794 435 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 STRN3Q13033 797 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 STK4Q13043 487 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 PAK2Q13177 524 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 MORC3Q14149 939 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 AMHR2Q16671 573 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 CTC1Q2NKJ3 1217 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 PLEKHG4Q58EX7 1191 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 L1TD1Q5T7N2 865 aaKnown RBP13.31□□□□□ -0.28
CCDC84-209ENST00000580556 TAS1R3Q7RTX0 852 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 ZNF507Q8TCN5 953 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 EDAQ92838 391 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 APBB2Q92870 758 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 ERCC4Q92889 916 aaPredicted RBP13.31□□□□□ -0.28
CCDC84-209ENST00000580556 PBXIP1Q96AQ6 731 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 SAMD11Q96NU1 681 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 YME1L1Q96TA2 773 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 ALG13Q9NP73 1137 aaKnown RBP13.31□□□□□ -0.28
CCDC84-209ENST00000580556 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 NOC2LQ9Y3T9 749 aaKnown RBP13.31□□□□□ -0.28
CCDC84-209ENST00000580556 KMT2EQ8IZD2 1858 aa13.31□□□□□ -0.28
CCDC84-209ENST00000580556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.3□□□□□ -0.28
CCDC84-209ENST00000580556 TMEM221A6NGB7 291 aa13.3□□□□□ -0.28
CCDC84-209ENST00000580556 M0R296 226 aa13.3□□□□□ -0.28
CCDC84-209ENST00000580556 GRM6O15303 877 aa13.3□□□□□ -0.28
CCDC84-209ENST00000580556 GFRA3O60609 400 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms