RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 PPP1R1BQ9UD71 204 aaPredicted RBP9.58□□□□□ -0.88
PPP4R1-213ENST00000579609 SALL4Q9UJQ4 1053 aa9.58□□□□□ -0.88
PPP4R1-213ENST00000579609 TMEM59LQ9UK28 342 aa9.58□□□□□ -0.88
PPP4R1-213ENST00000579609 AGTPBP1Q9UPW5 1226 aa9.58□□□□□ -0.88
PPP4R1-213ENST00000579609 ZNF233A6NK53 670 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 EXTL3O43909 919 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 RTN2O75298 545 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 HOXB3P14651 431 aaPredicted RBP9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 TNFAIP3P21580 790 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 ARL2P36404 184 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 NAP1L1P55209 391 aaKnown RBP9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 IRX3P78415 501 aaPredicted RBP9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 CBX1P83916 185 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 POU5F1BQ06416 359 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 CYP24A1Q07973 514 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 STRN3Q13033 797 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 IRF5Q13568 498 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 SMC1AQ14683 1233 aaKnown RBP9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 CASP8Q14790 479 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 EMC2Q15006 297 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 PSMD6Q15008 389 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 TARBP2Q15633 366 aaKnown RBP9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 AMHR2Q16671 573 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 HSP90B2PQ58FF3 399 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 C1orf220Q5T0J3 134 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 SWSAP1Q6NVH7 229 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 C8orf74Q6P047 294 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 C15orf39Q6ZRI6 1047 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 PLPPR4Q7Z2D5 763 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 CCDC60Q8IWA6 550 aaPredicted RBP9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 IFT20Q8IY31 132 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 MREGQ8N565 214 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 GOLGA6L1Q8N7Z2 621 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 USP38Q8NB14 1042 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 C1orf131Q8NDD1 294 aaKnown RBP9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 FAM71BQ8TC56 605 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 COG1Q8WTW3 980 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 SEPT1Q8WYJ6 367 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 CAVIN3Q969G5 261 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 TRIM11Q96F44 468 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 HES6Q96HZ4 224 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 WNK4Q96J92 1243 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 RUNDC3BQ96NL0 473 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 NT5C1BQ96P26 610 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 RPS6KC1Q96S38 1066 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 AGPAT1Q99943 283 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 CBWD1Q9BRT8 395 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 FAM129AQ9BZQ8 928 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 TMEM117Q9H0C3 514 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 FAM124BQ9H5Z6 455 aaPredicted RBP9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 XPNPEP1Q9NQW7 623 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 UVRAGQ9P2Y5 699 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 STXBP5LQ9Y2K9 1186 aa9.57□□□□□ -0.88
PPP4R1-213ENST00000579609 ZNF236Q9UL36 1845 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 CCDC169A6NNP5 214 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 A6NNZ2 444 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 PGRMC1O00264 195 aaKnown RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 PDE2AO00408 941 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 HNRNPDLO14979 420 aaKnown RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 ASAP2O43150 1006 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 MAFO75444 373 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 LGR5O75473 907 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 GGPS1O95749 300 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 NUDT7P0C024 238 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 RHOXF2BP0C7M4 288 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 TRIM49P0CI25 452 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 TRIM49CP0CI26 452 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 MYBL1P10243 752 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 ERCC3P19447 782 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 ADSSP30520 456 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 GBP1P32455 592 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 POLGP54098 1239 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 GALCP54803 685 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 ARID5AQ03989 594 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 PPP3CAQ08209 521 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 CUL1Q13616 776 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 MXD4Q14582 209 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 TUBB8Q3ZCM7 444 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 SPDYCQ5MJ68 293 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 IER5Q5VY09 327 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 TRIM72Q6ZMU5 477 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 PEX26Q7Z412 305 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 PARP9Q8IXQ6 854 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 DHX37Q8IY37 1157 aaKnown RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 EFCAB13Q8IY85 973 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 NLGN2Q8NFZ4 835 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 LNX1Q8TBB1 728 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 WHAMMQ8TF30 809 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 AENQ8WTP8 325 aaKnown RBP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 CEP89Q96ST8 783 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 RHOXF2Q9BQY4 288 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 NFKBIZQ9BYH8 718 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 C2orf40Q9H1Z8 148 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 GDF3Q9NR23 364 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 RAB20Q9NX57 234 aa9.56□□□□□ -0.88
PPP4R1-213ENST00000579609 PKD2L1Q9P0L9 805 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms