RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ZNF507Q8TCN5 953 aa11.04□□□□□ -0.64
CRLF3-202ENST00000577725 SLC7A3Q8WY07 619 aa11.04□□□□□ -0.64
CRLF3-202ENST00000577725 ANP32BQ92688 251 aaKnown RBP11.04□□□□□ -0.64
CRLF3-202ENST00000577725 PABPC5Q96DU9 382 aaKnown RBP11.04□□□□□ -0.64
CRLF3-202ENST00000577725 NAP1L5Q96NT1 182 aaPredicted RBP11.04□□□□□ -0.64
CRLF3-202ENST00000577725 PPP1R16BQ96T49 567 aa11.04□□□□□ -0.64
CRLF3-202ENST00000577725 XPO4Q9C0E2 1151 aaKnown RBP11.04□□□□□ -0.64
CRLF3-202ENST00000577725 TRPV6Q9H1D0 765 aa11.04□□□□□ -0.64
CRLF3-202ENST00000577725 UPF3AQ9H1J1 476 aaKnown RBP11.04□□□□□ -0.64
CRLF3-202ENST00000577725 TUT1Q9H6E5 874 aaKnown RBP11.04□□□□□ -0.64
CRLF3-202ENST00000577725 KMT5AQ9NQR1 393 aa11.04□□□□□ -0.64
CRLF3-202ENST00000577725 TAB2Q9NYJ8 693 aa11.04□□□□□ -0.64
CRLF3-202ENST00000577725 LARSQ9P2J5 1176 aaKnown RBP11.04□□□□□ -0.64
CRLF3-202ENST00000577725 ZNF215Q9UL58 517 aaPredicted RBP11.04□□□□□ -0.64
CRLF3-202ENST00000577725 USP20Q9Y2K6 914 aa11.04□□□□□ -0.64
CRLF3-202ENST00000577725 TECTAO75443 2155 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 LRRIQ4A6NIV6 560 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 KCNJ18B7U540 433 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 GALR2O43603 387 aaPredicted RBP11.03□□□□□ -0.64
CRLF3-202ENST00000577725 B4GALT4O60513 344 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 PPP1R37O75864 691 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 CABYRO75952 493 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 C22orf31O95567 290 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 SERPINC1P01008 464 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 SMIM10L2AP0DMW4 78 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 SMIM10L2BP0DMW5 78 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 CPT1AP50416 773 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 SLC26A2P50443 739 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 ERVK-21P61565 698 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 KCNJ12Q14500 433 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 ACAP1Q15027 740 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 KRT31Q15323 416 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 GRIK4Q16099 956 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 KNOP1Q1ED39 458 aaKnown RBP11.03□□□□□ -0.64
CRLF3-202ENST00000577725 KIAA0753Q2KHM9 967 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 EFCAB12Q6NXP0 572 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 LRRC55Q6ZSA7 311 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 EP400NLQ6ZTU2 488 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 HAUS6Q7Z4H7 955 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 METTL13Q8N6R0 699 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 TMEM161BQ8NDZ6 487 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 IFT74Q96LB3 600 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 CNOT6LQ96LI5 555 aaKnown RBP11.03□□□□□ -0.64
CRLF3-202ENST00000577725 TGS1Q96RS0 853 aaKnown RBP11.03□□□□□ -0.64
CRLF3-202ENST00000577725 STRA6Q9BX79 667 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 THAP9Q9H5L6 903 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 SETD4Q9NVD3 440 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 INTS13Q9NVM9 706 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 SUCLA2Q9P2R7 463 aaPredicted RBP11.03□□□□□ -0.64
CRLF3-202ENST00000577725 Q9Y3F1 56 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 UBE4BO95155 1302 aa11.03□□□□□ -0.64
CRLF3-202ENST00000577725 SIP14410 1827 aa11.02□□□□□ -0.64
CRLF3-202ENST00000577725 KMT2EQ8IZD2 1858 aa11.02□□□□□ -0.64
CRLF3-202ENST00000577725 BRWD1Q9NSI6 2320 aa11.02□□□□□ -0.64
CRLF3-202ENST00000577725 DENND3A2RUS2 1198 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 TGFB1I1O43294 461 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 CALUO43852 315 aaPredicted RBP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 KIF20AO95235 890 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 F2P00734 622 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 MAPTP10636 758 aaKnown RBP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 KLRC1P26715 233 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 RFC2P35250 354 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 COPB1P53618 953 aaKnown RBP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 UBASH3AP57075 661 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 LRRC63Q05C16 580 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 SIGLEC14Q08ET2 396 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 CCDC173Q0VFZ6 552 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 ITGA7Q13683 1181 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 CAPSQ13938 189 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 HIC1Q14526 733 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 PUM1Q14671 1186 aaKnown RBP eCLIP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 COL19A1Q14993 1142 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 TIGD5Q53EQ6 642 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 STXBP4Q6ZWJ1 553 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 TAS1R3Q7RTX0 852 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 APTXQ7Z2E3 356 aaKnown RBP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 SYCP3Q8IZU3 236 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 DEPTORQ8TB45 409 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 KCNV2Q8TDN2 545 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 NOC3LQ8WTT2 800 aaKnown RBP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 SPIRE2Q8WWL2 714 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 PRPF31Q8WWY3 499 aaKnown RBP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 ACCSQ96QU6 501 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 ZBED2Q9BTP6 218 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 TYW1Q9NV66 732 aaKnown RBP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 MAGEC2Q9UBF1 373 aaPredicted RBP11.02□□□□□ -0.65
CRLF3-202ENST00000577725 PPME1Q9Y570 386 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 PCDHB13Q9Y5F0 798 aa11.02□□□□□ -0.65
CRLF3-202ENST00000577725 IGKV6-21A0A0C4DH24 114 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 ANKRD63C9JTQ0 380 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 TEX33O43247 280 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 BAIAP3O94812 1187 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 NR3C1P04150 777 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 SRGAP2CP0DJJ0 459 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 MTIF2P46199 727 aaKnown RBP11.01□□□□□ -0.65
CRLF3-202ENST00000577725 KCNJ6P48051 423 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 CYP2J2P51589 502 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 SMTNP53814 917 aa11.01□□□□□ -0.65
CRLF3-202ENST00000577725 GTF2BQ00403 316 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms