RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 CLEC2LP0C7M8 214 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 BPIP17213 487 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 BMP5P22003 454 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 FAM189BP81408 668 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 ABHD15Q6UXT9 468 aa6.77□□□□□ -1.33
SMCHD1-202ENST00000577300 LEFTY2O00292 366 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 GASTP01350 101 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 ZSCAN20P17040 1043 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 DHCR24Q15392 516 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 CSRP2Q16527 193 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 ATP13A4Q4VNC1 1196 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 GPR150Q8NGU9 434 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 LEO1Q8WVC0 666 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 KCTD10Q9H3F6 313 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 TOR3AQ9H497 397 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 SPON1Q9HCB6 807 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 DKK2Q9UBU2 259 aa6.76□□□□□ -1.33
SMCHD1-202ENST00000577300 ZMYM3Q14202 1370 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 TBKBP1A7MCY6 615 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 ENPP3O14638 875 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 PDE8AO60658 829 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 ITGA10O75578 1167 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 CTSSP25774 331 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 MGAT1P26572 445 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 LGALS4P56470 323 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 HECTD2Q5U5R9 776 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 BTNL9Q6UXG8 535 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 PLXDC1Q8IUK5 500 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 SYT12Q8IV01 421 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 ARHGEF19Q8IW93 802 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 AKIP1Q9NQ31 210 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 GPRC5DQ9NZD1 345 aa6.75□□□□□ -1.33
SMCHD1-202ENST00000577300 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 LPXNO60711 386 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 NCR1O76036 304 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 LPLP06858 475 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 CRHR1P34998 444 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 BMPR1AP36894 532 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 ZEB1P37275 1124 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 NHLH2Q02577 135 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 PDCD1Q15116 288 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 CT83Q5H943 113 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 ANKS6Q68DC2 871 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 PDZD4Q76G19 769 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 OR10H5Q8NGA6 315 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 USP7Q93009 1102 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 SERHL2Q9H4I8 314 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 CYP4F11Q9HBI6 524 aa6.74□□□□□ -1.33
SMCHD1-202ENST00000577300 RBP3P10745 1247 aa6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 MYCLP1P12525 358 aaPredicted RBP6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 TGM1P22735 817 aa6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 RNASE9P60153 205 aaKnown RBP6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 FSCN1Q16658 493 aaKnown RBP6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 BMT2Q1RMZ1 405 aa6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 DPY19L2P1Q6NXN4 242 aa6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 EFCAB12Q6NXP0 572 aa6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 Q6YL49 198 aa6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 NPM2Q86SE8 214 aaKnown RBP6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 BEND2Q8NDZ0 799 aa6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 ZNF480Q8WV37 535 aa6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 ACAP3Q96P50 834 aa6.73□□□□□ -1.33
SMCHD1-202ENST00000577300 ZEB2O60315 1214 aa6.72□□□□□ -1.33
SMCHD1-202ENST00000577300 ULK1O75385 1050 aa6.72□□□□□ -1.33
SMCHD1-202ENST00000577300 SESN3P58005 492 aa6.72□□□□□ -1.33
SMCHD1-202ENST00000577300 UGT8Q16880 541 aa6.72□□□□□ -1.33
SMCHD1-202ENST00000577300 MDM1Q8TC05 714 aa6.72□□□□□ -1.33
SMCHD1-202ENST00000577300 TFAP2CQ92754 450 aa6.72□□□□□ -1.33
SMCHD1-202ENST00000577300 EAF2Q96CJ1 260 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-202ENST00000577300 IFT22Q9H7X7 185 aa6.72□□□□□ -1.33
SMCHD1-202ENST00000577300 RPTORQ8N122 1335 aa6.72□□□□□ -1.33
SMCHD1-202ENST00000577300 PHF2O75151 1096 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 NDUFA10O95299 355 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 NUDT3O95989 172 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 SPATA31D3P0C874 917 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 FBLP22087 321 aaKnown RBP6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 FLT3LGP49771 235 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 USP14P54578 494 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 SPATA31D4Q6ZUB0 917 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 PRIMA1Q86XR5 153 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 CEP95Q96GE4 821 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 RAX2Q96IS3 184 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 WDR11Q9BZH6 1224 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 TOPORSQ9NS56 1045 aaPredicted RBP6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 ANKFY1Q9P2R3 1169 aa6.71□□□□□ -1.34
SMCHD1-202ENST00000577300 NEMP1O14524 444 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 ZNF185O15231 689 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 PJA2O43164 708 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 ENPP1P22413 925 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 PDCD4Q53EL6 469 aaKnown RBP6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 MFSD14BQ5SR56 506 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 PRAMEF14Q5SWL7 426 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 FAM102AQ5T9C2 384 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 METRNLQ641Q3 311 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 RNF180Q86T96 592 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 CLRN3Q8NCR9 226 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 ZFP28Q8NHY6 868 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 COQ10AQ96MF6 247 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 TTC1Q99614 292 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 TEX101Q9BY14 249 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms