RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 RNF149Q8NC42 400 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 CNNM3Q8NE01 707 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 GSTCDQ8NEC7 633 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 CCDC148Q8NFR7 591 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 ETNPPLQ8TBG4 499 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 SHDQ96IW2 340 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 BCO2Q9BYV7 579 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 SLKQ9H2G2 1235 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 DHX33Q9H6R0 707 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 ZDHHC7Q9NXF8 308 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 CACNG4Q9UBN1 327 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 EPG5Q9HCE0 2579 aa11.3□□□□□ -0.6
NPLOC4-220ENST00000576940 DCDC2BA2VCK2 349 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 TSPAN1O60635 241 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 NR1I2O75469 434 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 AKAP5P24588 427 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 QARSP47897 775 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 CCT2P78371 535 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 ZNF528Q3MIS6 628 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 FERMT3Q86UX7 667 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 SKAP1Q86WV1 359 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 CDR2LQ86X02 465 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 ITFG1Q8TB96 612 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 PSPC1Q8WXF1 523 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 FGF13Q92913 245 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 DDX23Q9BUQ8 820 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 RNF26Q9BY78 433 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 KLK14Q9P0G3 267 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 FNIP2Q9P278 1114 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 FBXO4Q9UKT5 387 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 CDH7Q9ULB5 785 aa11.29□□□□□ -0.6
NPLOC4-220ENST00000576940 CCL16O15467 120 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 ASAP2O43150 1006 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 SLC37A4O43826 429 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 TADA2AO75478 443 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 ERLIN2O94905 339 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 C1RP00736 705 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 HMGB1P09429 215 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 KRT32Q14532 448 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 RTP2Q5QGT7 225 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 MBOAT7Q96N66 472 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 CLSTN3Q9BQT9 956 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 PAAF1Q9BRP4 392 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 CSRNP2Q9H175 543 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 RGL1Q9NZL6 768 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 DDX25Q9UHL0 483 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 ADAM28Q9UKQ2 775 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 PCDHA4Q9UN74 947 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 POLIQ9UNA4 740 aa11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 ZFP37Q9Y6Q3 630 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-220ENST00000576940 KMT2BQ9UMN6 2715 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 INO80B-WBP1J3KQ70 363 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 M0R2N6 131 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 CENPBP07199 599 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 P4HBP07237 508 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 IFNAR1P17181 557 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 TGM1P22735 817 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 PTENP60484 403 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 PRKCQQ04759 706 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 EMC2Q15006 297 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 INF2Q27J81 1249 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 NOTUMQ6P988 496 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 CEP57Q86XR8 500 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 BLIDQ8IZY5 108 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 ZBTB44Q8NCP5 570 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 LNX1Q8TBB1 728 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 HASPINQ8TF76 798 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 JAKMIP1Q96N16 626 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 KXD1Q9BQD3 176 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 NXF3Q9H4D5 531 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 LTB4R2Q9NPC1 389 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 SH3GLB2Q9NR46 395 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 FBXW11Q9UKB1 542 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 VAV3Q9UKW4 847 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 GIT1Q9Y2X7 761 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 TDRD15B5MCY1 1934 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 MYH15Q9Y2K3 1946 aa11.27□□□□□ -0.61
NPLOC4-220ENST00000576940 ACACBO00763 2458 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 SPTLC1O15269 473 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 ADAM12O43184 909 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 B4GALT5O43286 388 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 LILRB5O75023 590 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 C8AP07357 584 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 ARF4P18085 180 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 TARSP26639 723 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 PDIA3P30101 505 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 AXLP30530 894 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 YWHABP31946 246 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 RFC5P40937 340 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 NCBP1Q09161 790 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 PPP2R5CQ13362 524 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 FZD5Q13467 585 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 CTTNQ14247 550 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 AMHR2Q16671 573 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 XKR9Q5GH70 373 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms