RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 THNSL1Q8IYQ7 743 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 SYT2Q8N9I0 419 aaPredicted RBP9.15□□□□□ -0.94
RPAIN-215ENST00000575112 TTC16Q8NEE8 873 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 ATXN2LQ8WWM7 1075 aaKnown RBP9.15□□□□□ -0.94
RPAIN-215ENST00000575112 ATG4AQ8WYN0 398 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 ALG3Q92685 438 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 METTL14Q9HCE5 456 aaKnown RBP9.15□□□□□ -0.94
RPAIN-215ENST00000575112 WRAP73Q9P2S5 460 aaPredicted RBP9.15□□□□□ -0.94
RPAIN-215ENST00000575112 GAKO14976 1311 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 DIAPH2O60879 1101 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 LGR5O75473 907 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 YY1P25490 414 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 SLC12A3P55017 1021 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 ERMARDQ5T6L9 678 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 SEL1L2Q5TEA6 688 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 ERICH1Q86X53 443 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 ZBTB10Q96DT7 871 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 CHMP6Q96FZ7 201 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 C11orf70Q9BRQ4 267 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 GLT8D2Q9H1C3 349 aa9.15□□□□□ -0.95
RPAIN-215ENST00000575112 RPAP3Q9H6T3 665 aaPredicted RBP9.15□□□□□ -0.95
RPAIN-215ENST00000575112 SMCHD1A6NHR9 2005 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 ESYT2A0FGR8 921 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 ERFP50548 548 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 VAMP7P51809 220 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 POLGP54098 1239 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-215ENST00000575112 ARHGAP27Q6ZUM4 889 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 GDAP1Q8TB36 358 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 KRT35Q92764 455 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.14□□□□□ -0.953e-12■□□□□ 9
RPAIN-215ENST00000575112 AGPAT3Q9NRZ7 376 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 RNF146Q9NTX7 359 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 CCT8L1PA6NM43 557 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 KRT16P08779 473 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 ALDH5A1P51649 535 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-215ENST00000575112 POU5F1Q01860 360 aaKnown RBP9.14□□□□□ -0.95
RPAIN-215ENST00000575112 AP3B2Q13367 1082 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 TMEM119Q4V9L6 283 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 NT5DC3Q86UY8 548 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 OLIG1Q8TAK6 271 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 LNX1Q8TBB1 728 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-215ENST00000575112 FAM20AQ96MK3 541 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 CEP63Q96MT8 703 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 NAP1L4Q99733 375 aaKnown RBP9.14□□□□□ -0.95
RPAIN-215ENST00000575112 DDX23Q9BUQ8 820 aaKnown RBP9.14□□□□□ -0.95
RPAIN-215ENST00000575112 KIF9Q9HAQ2 790 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 DAAM1Q9Y4D1 1078 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 PCDHA2Q9Y5H9 948 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 KIAA1551Q9HCM1 1747 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 C5orf60A6NFR6 353 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 MAP3K6O95382 1288 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 YWHABP31946 246 aaKnown RBP9.14□□□□□ -0.95
RPAIN-215ENST00000575112 INHBEP58166 350 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 DMP1Q13316 513 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-215ENST00000575112 LONRF1Q17RB8 773 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 SLC27A3Q5K4L6 730 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 ARHGEF19Q8IW93 802 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 SLC35C1Q96A29 364 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 KCTD10Q9H3F6 313 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 FGFR1OP2Q9NVK5 253 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 ZMYND8Q9ULU4 1186 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-215ENST00000575112 COG5Q9UP83 839 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 TELO2Q9Y4R8 837 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 MYO3BQ8WXR4 1341 aa9.14□□□□□ -0.95
RPAIN-215ENST00000575112 STRCP1A6NGW2 1772 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 CEP350Q5VT06 3117 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 FERP16591 822 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 ADCY8P40145 1251 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 TFAMQ00059 246 aaKnown RBP9.13□□□□□ -0.95
RPAIN-215ENST00000575112 CXCL9Q07325 125 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 CALCOCO2Q13137 446 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 WDR44Q5JSH3 913 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 CIAPIN1Q6FI81 312 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 OTOP1Q7RTM1 612 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 SLC47A2Q86VL8 602 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 CCDC33Q8N5R6 958 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 SPDL1Q96EA4 605 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-215ENST00000575112 NLRP4Q96MN2 994 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 FMO2Q99518 471 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 MAGED2Q9UNF1 606 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-215ENST00000575112 RPTORQ8N122 1335 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 CLDN3O15551 220 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 ITGB5P18084 799 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 BRD2P25440 801 aaKnown RBP9.13□□□□□ -0.95
RPAIN-215ENST00000575112 PSMC4P43686 418 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 TTC27Q6P3X3 843 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 DCUN1D2Q6PH85 259 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 ZDHHC24Q6UX98 284 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 SUPT20HQ8NEM7 779 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 IFT74Q96LB3 600 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 FAM129AQ9BZQ8 928 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 NUCKS1Q9H1E3 243 aaKnown RBP9.13□□□□□ -0.95
RPAIN-215ENST00000575112 HSPBP1Q9NZL4 362 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 ANAPC7Q9UJX3 599 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 PCDHB4Q9Y5E5 795 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 SPDYE2BA6NHP3 402 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 POC1B-GALNT4F8VUJ3 575 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 hCG_1984214I3L0E3 225 aa9.13□□□□□ -0.95
RPAIN-215ENST00000575112 IGF2BP3O00425 579 aaKnown RBP eCLIP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms