RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SRGAP2BP0DMP2 458 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 CCT6AP40227 531 aaKnown RBP11.68□□□□□ -0.54
LITAF-216ENST00000574848 NAMPTP43490 491 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 SLC11A1P49279 550 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 AFF1P51825 1210 aaKnown RBP11.68□□□□□ -0.54
LITAF-216ENST00000574848 DSC1Q08554 894 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 NCBP1Q09161 790 aaKnown RBP11.68□□□□□ -0.54
LITAF-216ENST00000574848 CCDC173Q0VFZ6 552 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 UVSSAQ2YD98 709 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 TPRNQ4KMQ1 711 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 SLC27A1Q6PCB7 646 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 DDX53Q86TM3 631 aaKnown RBP11.68□□□□□ -0.54
LITAF-216ENST00000574848 RBM23Q86U06 439 aaKnown RBP11.68□□□□□ -0.54
LITAF-216ENST00000574848 KCTD17Q8N5Z5 321 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 MRPL43Q8N983 215 aaKnown RBP11.68□□□□□ -0.54
LITAF-216ENST00000574848 MICAL1Q8TDZ2 1067 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 SNX29Q8TEQ0 813 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 BSNDQ8WZ55 320 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 SUSD6Q92537 303 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 CPB2Q96IY4 423 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 CCDC113Q9H0I3 377 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 C2orf40Q9H1Z8 148 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 PRMT7Q9NVM4 692 aaPredicted RBP11.68□□□□□ -0.54
LITAF-216ENST00000574848 DNAJB4Q9UDY4 337 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 INPP5FQ9Y2H2 1132 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 GIT1Q9Y2X7 761 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 LRRIQ4A6NIV6 560 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 NT5C1B-RDH14C9J2C7 533 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 PER2O15055 1255 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 CUTAO60888 179 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 DDHD2O94830 711 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 EFEMP2O95967 443 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 CTSAP10619 480 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 ITGA4P13612 1032 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 LIG1P18858 919 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 RNASELQ05823 741 aaKnown RBP11.67□□□□□ -0.54
LITAF-216ENST00000574848 GIT2Q14161 759 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 PPP2R5AQ15172 486 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 CLUL1Q15846 466 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 IL17AQ16552 155 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 LONRF3Q496Y0 759 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 HYIQ5T013 277 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 SASS6Q6UVJ0 657 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 TMC7Q7Z402 723 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 ZNF280BQ86YH2 543 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 ZBTB8OSQ8IWT0 167 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 HACE1Q8IYU2 909 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 RNF168Q8IYW5 571 aaPredicted RBP11.67□□□□□ -0.54
LITAF-216ENST00000574848 FSIP1Q8NA03 581 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 KIFAP3Q92845 792 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 MMTAG2Q9BU76 263 aaKnown RBP11.67□□□□□ -0.54
LITAF-216ENST00000574848 VN1R3Q9BXE9 311 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 BHMT2Q9H2M3 363 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 NXF3Q9H4D5 531 aaKnown RBP11.67□□□□□ -0.54
LITAF-216ENST00000574848 PCDHA7Q9UN72 937 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 USP15Q9Y4E8 981 aaPredicted RBP11.67□□□□□ -0.54
LITAF-216ENST00000574848 CLIC4Q9Y696 253 aa11.67□□□□□ -0.54
LITAF-216ENST00000574848 MORC2Q9Y6X9 1032 aaPredicted RBP11.67□□□□□ -0.54
LITAF-216ENST00000574848 DENND4AQ7Z401 1863 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 ARL5CA6NH57 179 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 HOXB8P17481 243 aaPredicted RBP11.66□□□□□ -0.54
LITAF-216ENST00000574848 CMA1P23946 247 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 MLH1P40692 756 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 RBM10P98175 930 aaKnown RBP11.66□□□□□ -0.54
LITAF-216ENST00000574848 BMS1Q14692 1282 aaKnown RBP11.66□□□□□ -0.54
LITAF-216ENST00000574848 CBX2Q14781 532 aaPredicted RBP11.66□□□□□ -0.54
LITAF-216ENST00000574848 ZRSR1Q15695 479 aaKnown RBP11.66□□□□□ -0.54
LITAF-216ENST00000574848 KRT79Q5XKE5 535 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 ARL6IP4Q66PJ3 421 aaKnown RBP11.66□□□□□ -0.54
LITAF-216ENST00000574848 ANKRD54Q6NXT1 300 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 DTHD1Q6ZMT9 781 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 RBM43Q6ZSC3 357 aaKnown RBP11.66□□□□□ -0.54
LITAF-216ENST00000574848 MAEAQ7L5Y9 396 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 COLGALT2Q8IYK4 626 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 VPS52Q8N1B4 723 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 GSTCDQ8NEC7 633 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 CASP10Q92851 521 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 CCDC34Q96HJ3 373 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 S1PR5Q9H228 398 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 RNF39Q9H2S5 420 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 EPHX3Q9H6B9 360 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 C11orf16Q9NQ32 467 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 MARCH5Q9NX47 278 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 KIAA1024Q9UPX6 916 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 HES2Q9Y543 173 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 HCFC2Q9Y5Z7 792 aa11.66□□□□□ -0.54
LITAF-216ENST00000574848 PHLPP2Q6ZVD8 1323 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 PP2D1A8MPX8 630 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 LOC730098B7Z3J9 87 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 ACKR2O00590 384 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 NRP1O14786 923 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 N4BP3O15049 544 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 SLC26A4O43511 780 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 GPR37L1O60883 481 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 CLASP2O75122 1294 aaKnown RBP11.65□□□□□ -0.54
LITAF-216ENST00000574848 NR1I2O75469 434 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 NPTXRO95502 500 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 POMCP01189 267 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 EDN1P05305 212 aa11.65□□□□□ -0.54
LITAF-216ENST00000574848 PRKCBP05771 671 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms