RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 ITGA4P13612 1032 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 CYP11B2P19099 503 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 NCLP19338 710 aaKnown RBP11.05□□□□□ -0.64
RPA1-206ENST00000573994 MUTP22033 750 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 KRT17Q04695 432 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 ZP2Q05996 745 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 POU5F1BQ06416 359 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 CDCA2Q69YH5 1023 aaPredicted RBP11.05□□□□□ -0.64
RPA1-206ENST00000573994 PDE12Q6L8Q7 609 aaKnown RBP11.05□□□□□ -0.64
RPA1-206ENST00000573994 MRPL10Q7Z7H8 261 aaKnown RBP11.05□□□□□ -0.64
RPA1-206ENST00000573994 PACS2Q86VP3 889 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 ZBTB8OSQ8IWT0 167 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 GJD3Q8N144 294 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 IGSF22Q8N9C0 903 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 CCDC51Q96ER9 411 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 MSLNLQ96KJ4 702 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 ZFP42Q96MM3 310 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 GAD1Q99259 594 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 APOL5Q9BWW9 433 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 NFKBIZQ9BYH8 718 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 RAB34Q9BZG1 259 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 TRIM6Q9C030 488 aaPredicted RBP11.05□□□□□ -0.64
RPA1-206ENST00000573994 CSRNP2Q9H175 543 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 FAM50BQ9Y247 325 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 USP20Q9Y2K6 914 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 PRG3Q9Y2Y8 225 aaPredicted RBP11.05□□□□□ -0.64
RPA1-206ENST00000573994 CNTNAP2Q9UHC6 1331 aa11.05□□□□□ -0.64
RPA1-206ENST00000573994 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 ARL5CA6NH57 179 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 E9PMD0 336 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 DDHD2O94830 711 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 EDN1P05305 212 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 GALTP07902 379 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 AKAP5P24588 427 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 AXLP30530 894 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 SCNN1GP51170 649 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 ATP2C1P98194 919 aaPredicted RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 NCBP1Q09161 790 aaKnown RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 SMC1AQ14683 1233 aaKnown RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 SMAD2Q15796 467 aaKnown RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 TMEM132AQ24JP5 1023 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 RILPL1Q5EBL4 403 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 KRT79Q5XKE5 535 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 DTHD1Q6ZMT9 781 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 KCNK18Q7Z418 384 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 VPS52Q8N1B4 723 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 SMRP1Q8NCR6 262 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 DEPTORQ8TB45 409 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 IGSF21Q96ID5 467 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 FAM193BQ96PV7 902 aaPredicted RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 CDCA3Q99618 268 aaPredicted RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 MMTAG2Q9BU76 263 aaKnown RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 RUSC1Q9BVN2 902 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 VN1R3Q9BXE9 311 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 ZBP1Q9H171 429 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 EPHX3Q9H6B9 360 aa11.04□□□□□ -0.64
RPA1-206ENST00000573994 NGRNQ9NPE2 291 aaKnown RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 USP15Q9Y4E8 981 aaPredicted RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.04□□□□□ -0.64
RPA1-206ENST00000573994 VPS37CA5D8V6 355 aaPredicted RBP11.03□□□□□ -0.64
RPA1-206ENST00000573994 VWA3AA6NCI4 1184 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 FAM86C2PA6NEL3 165 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 C2orf71A6NGG8 1288 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 F8W810 466 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 LAD1O00515 517 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 SSBP05455 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
RPA1-206ENST00000573994 PRKCBP05771 671 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 PRPHP41219 470 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 PDIA5Q14554 519 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 LARP1BQ659C4 914 aaKnown RBP11.03□□□□□ -0.64
RPA1-206ENST00000573994 SLC27A1Q6PCB7 646 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 ADHFE1Q8IWW8 467 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 PLIN2Q99541 437 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 BACH2Q9BYV9 841 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 C2orf40Q9H1Z8 148 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 PDZD7Q9H5P4 517 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 PRMT7Q9NVM4 692 aaPredicted RBP11.03□□□□□ -0.64
RPA1-206ENST00000573994 KLK14Q9P0G3 267 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 PARP2Q9UGN5 583 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 CDH22Q9UJ99 828 aa11.03□□□□□ -0.64
RPA1-206ENST00000573994 CLASP2O75122 1294 aaKnown RBP11.02□□□□□ -0.65
RPA1-206ENST00000573994 HIP1RO75146 1068 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 EYA4O95677 639 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 CXCL14O95715 111 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 SRGAP2BP0DMP2 458 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 NAMPTP43490 491 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 OR1G1P47890 313 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 RAD51AP2Q09MP3 1159 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 COASYQ13057 564 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 PRPF4BQ13523 1007 aaKnown RBP11.02□□□□□ -0.65
RPA1-206ENST00000573994 MAPK6Q16659 721 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 HACE1Q8IYU2 909 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 MRPL43Q8N983 215 aaKnown RBP11.02□□□□□ -0.65
RPA1-206ENST00000573994 CNNM3Q8NE01 707 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 ZFRQ96KR1 1074 aaKnown RBP11.02□□□□□ -0.65
RPA1-206ENST00000573994 IFT74Q96LB3 600 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 PRIMPOLQ96LW4 560 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 PNMA5Q96PV4 448 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 CCDC113Q9H0I3 377 aa11.02□□□□□ -0.65
RPA1-206ENST00000573994 FZD8Q9H461 694 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms