RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 TNFRSF25Q93038 417 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 ZFP42Q96MM3 310 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 POLR3FQ9H1D9 316 aaPredicted RBP13.52□□□□□ -0.25
CCDC40-210ENST00000573903 NXF3Q9H4D5 531 aaKnown RBP13.52□□□□□ -0.25
CCDC40-210ENST00000573903 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCDC40-210ENST00000573903 IGSF9Q9P2J2 1179 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 ZMYM2Q9UBW7 1377 aa13.52□□□□□ -0.25
CCDC40-210ENST00000573903 CCDC195A0A1B0GUA6 201 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 TEX28O15482 410 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 NPTXRO95502 500 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 RFX1P22670 979 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 GLRA2P23416 452 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 ARL2P36404 184 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 CLCN5P51795 746 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 FOSBP53539 338 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 DSG1Q02413 1049 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 SAFBQ15424 915 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC40-210ENST00000573903 USP41Q3LFD5 358 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 TMEM105Q8N8V8 129 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 MCPH1Q8NEM0 835 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 PIGOQ8TEQ8 1089 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 PIDD1Q9HB75 910 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 PARP2Q9UGN5 583 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 DUSP12Q9UNI6 340 aa13.51□□□□□ -0.25
CCDC40-210ENST00000573903 CLUHO75153 1309 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 BTBD18B2RXH4 712 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 XRCC6P12956 609 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCDC40-210ENST00000573903 FDPSP14324 419 aaKnown RBP13.5□□□□□ -0.25
CCDC40-210ENST00000573903 AKAP5P24588 427 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 NEK4P51957 841 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 AMHR2Q16671 573 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 ME3Q16798 604 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 FUT10Q6P4F1 479 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 MAEAQ7L5Y9 396 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 RNF168Q8IYW5 571 aaPredicted RBP13.5□□□□□ -0.25
CCDC40-210ENST00000573903 NSUN7Q8NE18 718 aaKnown RBP13.5□□□□□ -0.25
CCDC40-210ENST00000573903 ERMNQ8TAM6 284 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 HDAC7Q8WUI4 952 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 SMG7Q92540 1137 aaKnown RBP13.5□□□□□ -0.25
CCDC40-210ENST00000573903 PRIMPOLQ96LW4 560 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 RHOBTB2Q9BYZ6 727 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 PLEKHA4Q9H4M7 779 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 KCNK12Q9HB15 430 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 RXFP1Q9HBX9 757 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 WDR6Q9NNW5 1121 aaKnown RBP13.5□□□□□ -0.25
CCDC40-210ENST00000573903 TUFT1Q9NNX1 390 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 PRMT7Q9NVM4 692 aaPredicted RBP13.5□□□□□ -0.25
CCDC40-210ENST00000573903 ADAM28Q9UKQ2 775 aa13.5□□□□□ -0.25
CCDC40-210ENST00000573903 MTCL1Q9Y4B5 1905 aaKnown RBP13.49□□□□□ -0.25
CCDC40-210ENST00000573903 SF3B1O75533 1304 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC40-210ENST00000573903 POTEMA6NI47 508 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 B4GALT5O43286 388 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 TADA2AO75478 443 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 LARGE1O95461 756 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 C1RP00736 705 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 MYBP10242 640 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 ATP2B1P20020 1258 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 KIAA0319Q5VV43 1072 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 CDR2LQ86X02 465 aaPredicted RBP13.49□□□□□ -0.25
CCDC40-210ENST00000573903 PALB2Q86YC2 1186 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 GPR65Q8IYL9 337 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 RIN2Q8WYP3 895 aaPredicted RBP13.49□□□□□ -0.25
CCDC40-210ENST00000573903 RTP3Q9BQQ7 232 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 ADPGKQ9BRR6 497 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 C2orf40Q9H1Z8 148 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 MIOSQ9NXC5 875 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 ZDHHC7Q9NXF8 308 aa13.49□□□□□ -0.25
CCDC40-210ENST00000573903 A0A1B0GUA9 196 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 STK25O00506 426 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 N4BP3O15049 544 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 RFPL2O75678 378 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 MCM7P33993 719 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 RBM25P49756 843 aaKnown RBP13.48□□□□□ -0.25
CCDC40-210ENST00000573903 HSP90AA2PQ14568 343 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-210ENST00000573903 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 GLYCTKQ8IVS8 523 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 SIX5Q8N196 739 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 FEZF2Q8TBJ5 459 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 NXPE3Q969Y0 559 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 MTMR9Q96QG7 549 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 NACC1Q96RE7 527 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 GPRC5CQ9NQ84 441 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 CHST7Q9NS84 486 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 KLK14Q9P0G3 267 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 FNIP2Q9P278 1114 aa13.48□□□□□ -0.25
CCDC40-210ENST00000573903 ARHGEF35A5YM69 484 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 PROB1E7EW31 1015 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 F8W810 466 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 TGM5O43548 720 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 JAK2O60674 1132 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 EFEMP2O95967 443 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 SPATA31D3P0C874 917 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 AOC1P19801 751 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 ORC2Q13416 577 aaPredicted RBP13.47□□□□□ -0.25
CCDC40-210ENST00000573903 TUSC3Q13454 348 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 PRPF4BQ13523 1007 aaKnown RBP13.47□□□□□ -0.25
CCDC40-210ENST00000573903 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms