RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 CDCA3Q99618 268 aaPredicted RBP17.78■□□□□ 0.44
NDE1-205ENST00000572756 VN1R3Q9BXE9 311 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 TLE6Q9H808 572 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 KMT5AQ9NQR1 393 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 ENTPD7Q9NQZ7 604 aa17.78■□□□□ 0.44
NDE1-205ENST00000572756 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
NDE1-205ENST00000572756 RBM19Q9Y4C8 960 aaKnown RBP17.78■□□□□ 0.44
NDE1-205ENST00000572756 NPHP3-ACAD11A0A0J9YXS1 232 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 GRXCR2A6NFK2 248 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 SFI1A8K8P3 1242 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 PER2O15055 1255 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 PLS3P13797 630 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 NASPP49321 788 aaPredicted RBP17.77■□□□□ 0.44
NDE1-205ENST00000572756 CEBPZQ03701 1054 aaKnown RBP17.77■□□□□ 0.44
NDE1-205ENST00000572756 KCNC3Q14003 757 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 SLC39A14Q15043 492 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 PUS10Q3MIT2 529 aaKnown RBP17.77■□□□□ 0.44
NDE1-205ENST00000572756 ATF7IP2Q5U623 682 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 PTCRAQ6ISU1 281 aaPredicted RBP17.77■□□□□ 0.44
NDE1-205ENST00000572756 EP400NLQ6ZTU2 488 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 TMC7Q7Z402 723 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 DDX53Q86TM3 631 aaKnown RBP17.77■□□□□ 0.44
NDE1-205ENST00000572756 VN1R2Q8NFZ6 395 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 RAD54LQ92698 747 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 MSLNLQ96KJ4 702 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 CLIC6Q96NY7 704 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 FAM193BQ96PV7 902 aaPredicted RBP17.77■□□□□ 0.44
NDE1-205ENST00000572756 ADPGKQ9BRR6 497 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 ZBP1Q9H171 429 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 CLEC1BQ9P126 229 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 TNFSF13BQ9Y275 285 aa17.77■□□□□ 0.44
NDE1-205ENST00000572756 C5orf42Q9H799 3197 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 FSD2A1L4K1 749 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 NRP1O14786 923 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 SLC16A4O15374 487 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 ALDH2P05091 517 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 MCM6Q14566 821 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 SMC1AQ14683 1233 aaKnown RBP17.76■□□□□ 0.43
NDE1-205ENST00000572756 DCAF4L1Q3SXM0 396 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 SPECC1Q5M775 1068 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 VPS52Q8N1B4 723 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 MRPL43Q8N983 215 aaKnown RBP17.76■□□□□ 0.43
NDE1-205ENST00000572756 TMEM161BQ8NDZ6 487 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 KCNN1Q92952 543 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 ACO2Q99798 780 aaKnown RBP17.76■□□□□ 0.43
NDE1-205ENST00000572756 PTPRHQ9HD43 1115 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 MARCH5Q9NX47 278 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 SNTG2Q9NY99 539 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 KLK14Q9P0G3 267 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 PARP2Q9UGN5 583 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 ODF2LQ9ULJ1 636 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 FAN1Q9Y2M0 1017 aa17.76■□□□□ 0.43
NDE1-205ENST00000572756 C2orf71A6NGG8 1288 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 RECQL4O94761 1208 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 EFEMP2O95967 443 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 CTSAP10619 480 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 PDIA4P13667 645 aaKnown RBP17.75■□□□□ 0.43
NDE1-205ENST00000572756 IL9P15248 144 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 PROZP22891 400 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 NDUFV1P49821 464 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 ZNF131P52739 623 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 CACNB1Q02641 598 aaPredicted RBP17.75■□□□□ 0.43
NDE1-205ENST00000572756 GRIK3Q13003 919 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 TMEM132AQ24JP5 1023 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 TMEM184AQ6ZMB5 413 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 GPBP1Q86WP2 473 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 LINC00301Q8NCQ3 95 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 REEP2Q9BRK0 252 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 MRPL4Q9BYD3 311 aaKnown RBP17.75■□□□□ 0.43
NDE1-205ENST00000572756 KCNG1Q9UIX4 513 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 IRAK3Q9Y616 596 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 CITO14578 2027 aa17.75■□□□□ 0.43
NDE1-205ENST00000572756 TNFRSF10AO00220 468 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 ABLIM1O14639 778 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 PTGESO14684 152 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 MAPTP10636 758 aaKnown RBP17.74■□□□□ 0.43
NDE1-205ENST00000572756 DDIT3P35638 169 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 NCKAP1LP55160 1127 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 RBM10P98175 930 aaKnown RBP17.74■□□□□ 0.43
NDE1-205ENST00000572756 COASYQ13057 564 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 GIT2Q14161 759 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 RNF168Q8IYW5 571 aaPredicted RBP17.74■□□□□ 0.43
NDE1-205ENST00000572756 KRI1Q8N9T8 703 aaKnown RBP17.74■□□□□ 0.43
NDE1-205ENST00000572756 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 LARP4BQ92615 738 aaKnown RBP17.74■□□□□ 0.43
NDE1-205ENST00000572756 TARS2Q9BW92 718 aaKnown RBP17.74■□□□□ 0.43
NDE1-205ENST00000572756 CDT1Q9H211 546 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 CXCL16Q9H2A7 254 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 LARSQ9P2J5 1176 aaKnown RBP17.74■□□□□ 0.43
NDE1-205ENST00000572756 STK39Q9UEW8 545 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 CD207Q9UJ71 328 aa17.74■□□□□ 0.43
NDE1-205ENST00000572756 BARX2Q9UMQ3 279 aaPredicted RBP17.74■□□□□ 0.43
NDE1-205ENST00000572756 PRG3Q9Y2Y8 225 aaPredicted RBP17.74■□□□□ 0.43
NDE1-205ENST00000572756 MBTPS2O43462 519 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 CXCL14O95715 111 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 HSP90AA1P07900 732 aaKnown RBP17.73■□□□□ 0.43
NDE1-205ENST00000572756 ZSCAN22P10073 491 aaPredicted RBP17.73■□□□□ 0.43
NDE1-205ENST00000572756 OR1G1P47890 313 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 SMTNP53814 917 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 SMAD4Q13485 552 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms