RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CCDC195A0A1B0GUA6 201 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 TTLL13PA6NNM8 815 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 USO1O60763 962 aaKnown RBP19.48■□□□□ 0.71
CIITA-206ENST00000571190 RFPL2O75678 378 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 PAPLNO95428 1278 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 NPTXRO95502 500 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 ADH1AP07327 375 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 ASTLQ6HA08 431 aaPredicted RBP19.48■□□□□ 0.71
CIITA-206ENST00000571190 SLC27A1Q6PCB7 646 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 MAEAQ7L5Y9 396 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 CATSPER3Q86XQ3 398 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 RABGGTAQ92696 567 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 ATOH1Q92858 354 aaPredicted RBP19.48■□□□□ 0.71
CIITA-206ENST00000571190 ZNF707Q96C28 371 aaPredicted RBP19.48■□□□□ 0.71
CIITA-206ENST00000571190 RHOBTB2Q9BYZ6 727 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 KCNK12Q9HB15 430 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 KLK14Q9P0G3 267 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 SSX2IPQ9Y2D8 614 aa19.48■□□□□ 0.71
CIITA-206ENST00000571190 SPDYE4A6NLX3 237 aa19.47■□□□□ 0.71
CIITA-206ENST00000571190 MED24O75448 989 aa19.47■□□□□ 0.71
CIITA-206ENST00000571190 NPR3P17342 541 aa19.47■□□□□ 0.71
CIITA-206ENST00000571190 NEK4P51957 841 aa19.47■□□□□ 0.71
CIITA-206ENST00000571190 TDGQ13569 410 aa19.47■□□□□ 0.71
CIITA-206ENST00000571190 CWF19L1Q69YN2 538 aaKnown RBP19.47■□□□□ 0.71
CIITA-206ENST00000571190 COLEC11Q9BWP8 271 aa19.47■□□□□ 0.71
CIITA-206ENST00000571190 TRIM6Q9C030 488 aaPredicted RBP19.47■□□□□ 0.71
CIITA-206ENST00000571190 FZD8Q9H461 694 aa19.47■□□□□ 0.71
CIITA-206ENST00000571190 WDR6Q9NNW5 1121 aaKnown RBP19.47■□□□□ 0.71
CIITA-206ENST00000571190 CACNG4Q9UBN1 327 aa19.47■□□□□ 0.71
CIITA-206ENST00000571190 KMT2EQ8IZD2 1858 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 GLUD1P00367 558 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 SPATA31D3P0C874 917 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 MCM7P33993 719 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 CDCA2Q69YH5 1023 aaPredicted RBP19.46■□□□□ 0.71
CIITA-206ENST00000571190 FUT10Q6P4F1 479 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 LILRA6Q6PI73 481 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 POTEGQ6S5H5 508 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 SPATA31D4Q6ZUB0 917 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 BSNDQ8WZ55 320 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 PAAF1Q9BRP4 392 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 IRF2BPLQ9H1B7 796 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 CXCL16Q9H2A7 254 aa19.46■□□□□ 0.71
CIITA-206ENST00000571190 LRRIQ4A6NIV6 560 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 PI15O43692 258 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 ATP2B1P20020 1258 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 CLCN5P51795 746 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 GUCY1B3Q02153 619 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 GRIK3Q13003 919 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 PALB2Q86YC2 1186 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 GPR65Q8IYL9 337 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 RSAD2Q8WXG1 361 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 CCDC43Q96MW1 224 aaKnown RBP19.45■□□□□ 0.7
CIITA-206ENST00000571190 MYADMQ96S97 322 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 TUFT1Q9NNX1 390 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 PARP2Q9UGN5 583 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 ADAM28Q9UKQ2 775 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 DUSP12Q9UNI6 340 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 USP20Q9Y2K6 914 aa19.45■□□□□ 0.7
CIITA-206ENST00000571190 PROB1E7EW31 1015 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 TGM5O43548 720 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 NARSO43776 548 aaKnown RBP19.44■□□□□ 0.7
CIITA-206ENST00000571190 ST18O60284 1047 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 GFRA3O60609 400 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 NR1I2O75469 434 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 SEC24BO95487 1268 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 C1RP00736 705 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 EDN1P05305 212 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 RPL17P18621 184 aaKnown RBP19.44■□□□□ 0.7
CIITA-206ENST00000571190 TRIM29Q14134 588 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 FAM187BQ17R55 369 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 USP41Q3LFD5 358 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 CYP26C1Q6V0L0 522 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 HACE1Q8IYU2 909 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 HDAC7Q8WUI4 952 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 PRIMPOLQ96LW4 560 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 POLR3CQ9BUI4 534 aaPredicted RBP19.44■□□□□ 0.7
CIITA-206ENST00000571190 NT5C3AQ9H0P0 336 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 FNIP2Q9P278 1114 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 CLUHO75153 1309 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 ZMYM2Q9UBW7 1377 aa19.44■□□□□ 0.7
CIITA-206ENST00000571190 PTGESO14684 152 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 NAB2Q15742 525 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 RTP2Q5QGT7 225 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 GLYCTKQ8IVS8 523 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 MCPH1Q8NEM0 835 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 FLCNQ8NFG4 579 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 RIN2Q8WYP3 895 aaPredicted RBP19.43■□□□□ 0.7
CIITA-206ENST00000571190 SMG7Q92540 1137 aaKnown RBP19.43■□□□□ 0.7
CIITA-206ENST00000571190 MFSD1Q9H3U5 465 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 PLEKHA4Q9H4M7 779 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 PDZD7Q9H5P4 517 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 PRMT7Q9NVM4 692 aaPredicted RBP19.43■□□□□ 0.7
CIITA-206ENST00000571190 IGSF9Q9P2J2 1179 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 DPP7Q9UHL4 492 aa19.43■□□□□ 0.7
CIITA-206ENST00000571190 RPA1P27694 616 aa19.42■□□□□ 0.7
CIITA-206ENST00000571190 HSP90AA2PQ14568 343 aaPredicted RBP19.42■□□□□ 0.7
CIITA-206ENST00000571190 ZNF174Q15697 407 aa19.42■□□□□ 0.7
CIITA-206ENST00000571190 PRSS55Q6UWB4 352 aaPredicted RBP19.42■□□□□ 0.7
CIITA-206ENST00000571190 NACC1Q96RE7 527 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms