RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 RPS6KA5O75582 802 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 CLTBP09497 229 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 GHRP10912 638 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 EPB41P11171 864 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 HARSP12081 509 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 DARSP14868 501 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 SELPP16109 830 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 BMP6P22004 513 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 EIF4BP23588 611 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 NR2F2P24468 414 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 CYP2J2P51589 502 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 PTPN5P54829 565 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 SNRPFP62306 86 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 MBTD1Q05BQ5 628 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 NOLC1Q14978 699 aaKnown RBP eCLIP7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 SNX17Q15036 470 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 EDRF1Q3B7T1 1238 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZNF568Q3ZCX4 644 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 CCDC40Q4G0X9 1142 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 ATF7IP2Q5U623 682 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 C1orf53Q5VUE5 145 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 SLFN12LQ6IEE8 588 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 BLOC1S3Q6QNY0 202 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZPBP2Q6X784 338 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 EPM2AIP1Q7L775 607 aaPredicted RBP7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 ANKRD33Q7Z3H0 272 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 USP37Q86T82 979 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 RPAINQ86UA6 219 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 CREBRFQ8IUR6 639 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 TNS4Q8IZW8 715 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 USP38Q8NB14 1042 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 GLIS3Q8NEA6 775 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZNF507Q8TCN5 953 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 POMGNT1Q8WZA1 660 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 ABHD8Q96I13 439 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 TOX2Q96NM4 488 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 FIZ1Q96SL8 496 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 NTPCRQ9BSD7 190 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 HTATIP2Q9BUP3 242 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 PPP1R12CQ9BZL4 782 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 TRIM6Q9C030 488 aaPredicted RBP7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 IFT122Q9HBG6 1241 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 CBX8Q9HC52 389 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 AGPAT3Q9NRZ7 376 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 FRMD4BQ9Y2L6 1034 aa7.2□□□□□ -1.26
CTDNEP1-204ENST00000570484 DOCK3Q8IZD9 2030 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CCDC85CA6NKD9 419 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 PES1O00541 588 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 ACKR2O00590 384 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 KIAA0391O15091 583 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CETN3O15182 167 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 GPR182O15218 404 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 SLC16A3O15427 465 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CLDN3O15551 220 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 TSPAN1O60635 241 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 EXOC3O60645 756 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 GPR32O75388 356 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 TOM1L1O75674 476 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 PARNO95453 639 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 GNA14O95837 355 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 NR3C1P04150 777 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 TPM3P06753 285 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CKBP12277 381 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 EN2P19622 333 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CDK11BP21127 795 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 AXLP30530 894 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CDK7P50613 346 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 FKBP3Q00688 224 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 TLE2Q04725 743 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 SPAG1Q07617 926 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 KCNA1Q09470 495 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 NFX1Q12986 1120 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 LRRC26Q2I0M4 334 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 DCAF4L1Q3SXM0 396 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZNF618Q5T7W0 954 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 SPATA1Q5VX52 437 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CEP135Q66GS9 1140 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 TWF2Q6IBS0 349 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 NOTUMQ6P988 496 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 FOXR2Q6PJQ5 311 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 MPZL3Q6UWV2 235 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 TSHZ1Q6ZSZ6 1077 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 LUZP1Q86V48 1076 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 HACE1Q8IYU2 909 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 ENOX1Q8TC92 643 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 DHX38Q92620 1227 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 ANP32BQ92688 251 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 WNT8BQ93098 351 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CCDC51Q96ER9 411 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CEP63Q96MT8 703 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 MSTO1Q9BUK6 570 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 TARS2Q9BW92 718 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 CCDC113Q9H0I3 377 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 ADAMTS10Q9H324 1103 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 AGPAT5Q9NUQ2 364 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 TMEM39AQ9NV64 488 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 TRAF3IP3Q9Y228 551 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 NFE2L3Q9Y4A8 694 aa7.19□□□□□ -1.26
CTDNEP1-204ENST00000570484 HTTP42858 3142 aa7.18□□□□□ -1.26
CTDNEP1-204ENST00000570484 CLIC2O15247 247 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms