RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 MRPL4Q9BYD3 311 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 CEP350Q5VT06 3117 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 PTPRJQ12913 1337 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 ZNF263O14978 683 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 FANCGO15287 622 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 ELNP15502 786 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 EIF4A3P38919 411 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 CDK17Q00537 523 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 FSCN1Q16658 493 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 SFMBT2Q5VUG0 894 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 AP5M1Q9H0R1 490 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 LZTFL1Q9NQ48 299 aa11.88□□□□□ -0.51
PDXDC1-216ENST00000569715 FAM189A1O60320 539 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 TNFSF9P41273 254 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 CPT1AP50416 773 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 JAM2P57087 298 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 EEF1DP3Q658K8 133 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 PHLDB3Q6NSJ2 640 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 ZPBP2Q6X784 338 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 KIAA0319LQ8IZA0 1049 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 ZNF592Q92610 1267 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 SEMA4DQ92854 862 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 C2orf40Q9H1Z8 148 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 FZD8Q9H461 694 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 R3HCC1Q9Y3T6 440 aaKnown RBP11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 ZNF233A6NK53 670 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 CCP110O43303 1012 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 VEGFBP49765 207 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 CYP27A1Q02318 531 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 TMEM62Q0P6H9 643 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 SLFN12LQ6IEE8 588 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 ARHGEF19Q8IW93 802 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 CD99L2Q8TCZ2 262 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 TMC2Q8TDI7 906 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 FAM49AQ9H0Q0 323 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 PDE11AQ9HCR9 933 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 TOM1L1O75674 476 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 C6orf222P0C671 652 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 PSEN2P49810 448 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 CACNB2Q08289 660 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 MFSD14CQ5VZR4 134 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 NFRKBQ6P4R8 1299 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 RUFY4Q6ZNE9 571 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 EHBP1Q8NDI1 1231 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 ZNF516Q92618 1163 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 SPAG5Q96R06 1193 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 TRIM10Q9UDY6 481 aa11.87□□□□□ -0.51
PDXDC1-216ENST00000569715 HAS3O00219 553 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 ACKR2O00590 384 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 CLDN3O15551 220 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 ASAP2O43150 1006 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 PGK1P00558 417 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 YY1P25490 414 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 TDRD12Q587J7 1177 aaKnown RBP11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 TCHPQ9BT92 498 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 GPR88Q9GZN0 384 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 RBAKQ9NYW8 714 aaPredicted RBP11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 APEX2Q9UBZ4 518 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 FBXL5Q9UKA1 691 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 DNAJC12Q9UKB3 198 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 ANK1P16157 1881 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 N4BP1O75113 896 aaKnown RBP11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 TMOD1P28289 359 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 ARHGAP25P42331 645 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 PHKA2P46019 1235 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 KIF11P52732 1056 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 PURAQ00577 322 aaKnown RBP11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 PRPF4BQ13523 1007 aaKnown RBP11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 AMHR2Q16671 573 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 SYT10Q6XYQ8 523 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 TAS1R2Q8TE23 839 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 SYN2Q92777 582 aaPredicted RBP11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 CCDC42Q96M95 316 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 AIPL1Q9NZN9 384 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 Q9Y3F1 56 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 DUSP11O75319 330 aaKnown RBP11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 PROZP22891 400 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 CCND3P30281 292 aaPredicted RBP11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 PSMD6Q15008 389 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 ASIC2Q16515 512 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 ASTE1Q2TB18 679 aaPredicted RBP11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 ATF7IP2Q5U623 682 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 SV2AQ7L0J3 742 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 CEP120Q8N960 986 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 NLRP7Q8WX94 980 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 KAT5Q92993 513 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 MAP7D2Q96T17 732 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 NFKBIZQ9BYH8 718 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 TMEM8AQ9HCN3 771 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 PTPRHQ9HD43 1115 aa11.86□□□□□ -0.51
PDXDC1-216ENST00000569715 CYLC1P35663 651 aaPredicted RBP11.85□□□□□ -0.51
PDXDC1-216ENST00000569715 GPC3P51654 580 aa11.85□□□□□ -0.51
PDXDC1-216ENST00000569715 KIZQ2M2Z5 673 aa11.85□□□□□ -0.51
PDXDC1-216ENST00000569715 KRT39Q6A163 491 aa11.85□□□□□ -0.51
PDXDC1-216ENST00000569715 TSHZ1Q6ZSZ6 1077 aa11.85□□□□□ -0.51
PDXDC1-216ENST00000569715 IRF2BP2Q7Z5L9 587 aa11.85□□□□□ -0.51
PDXDC1-216ENST00000569715 CCDC170Q8IYT3 715 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms