RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 PLXNA4Q9HCM2 1894 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 MYH11P35749 1972 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 MYMKA6NI61 221 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 H0YCG3 227 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 ABLIM1O14639 778 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 FSCN2O14926 492 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 ZC3H11AO75152 810 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 FAM13AO94988 1023 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 POMCP01189 267 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 SCP2P22307 547 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 SLC11A1P49279 550 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 ERVFC1P60507 584 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 KRT17Q04695 432 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 DSC1Q08554 894 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 SKIV2LQ15477 1246 aaKnown RBP12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 E2F4Q16254 413 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 DCAF4L1Q3SXM0 396 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 PDE12Q6L8Q7 609 aaKnown RBP12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 SV2BQ7L1I2 683 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 HAUS6Q7Z4H7 955 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 TMEM173Q86WV6 379 aaPredicted RBP12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 HLA-CQ95604 372 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 DNAJC19Q96DA6 116 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 TMEM175Q9BSA9 504 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 TARS2Q9BW92 718 aaKnown RBP12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 APOL6Q9BWW8 343 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 TLR9Q9NR96 1032 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 SNTG2Q9NY99 539 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 PUF60Q9UHX1 559 aaKnown RBP12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
SHCBP1-207ENST00000569702 NT5C1B-RDH14C9J2C7 533 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 TRAK2O60296 914 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 ALDH2P05091 517 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 KRT18P05783 430 aaKnown RBP12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 STAT6P42226 847 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 SCNN1GP51170 649 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 HYAL1Q12794 435 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 STRN3Q13033 797 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 ZPBP2Q6X784 338 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 COLGALT2Q8IYK4 626 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 MYCT1Q8N699 235 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 PDILTQ8N807 584 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 BCL7CQ8WUZ0 217 aaPredicted RBP12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 DDX12PQ92771 950 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 IGSF21Q96ID5 467 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 ASB2Q96Q27 587 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 GBP3Q9H0R5 595 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 CDT1Q9H211 546 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 ST6GALNAC4Q9H4F1 302 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 PARP2Q9UGN5 583 aa12.16□□□□□ -0.46
SHCBP1-207ENST00000569702 PTGESO14684 152 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 NRP1O14786 923 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 NCK2O43639 380 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 TBCAO75347 108 aaKnown RBP12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 TOM1L1O75674 476 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 RECQL4O94761 1208 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 MCF2P10911 925 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 GRM5P41594 1212 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 ME1P48163 572 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 MRPS5P82675 430 aaKnown RBP12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 GTF2BQ00403 316 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 TFF2Q03403 129 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 GRIK3Q13003 919 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 DYMQ7RTS9 669 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 APBB1IPQ7Z5R6 666 aaPredicted RBP12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 ADGRD2Q7Z7M1 963 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 DDX53Q86TM3 631 aaKnown RBP12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 PABPC5Q96DU9 382 aaKnown RBP12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 TMEM169Q96HH4 297 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 CHAMP1Q96JM3 812 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 FAM193BQ96PV7 902 aaPredicted RBP12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 CXCL16Q9H2A7 254 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 CUEDC2Q9H467 287 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 UBE2ZQ9H832 354 aaPredicted RBP12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 NGRNQ9NPE2 291 aaKnown RBP12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 KBTBD4Q9NVX7 518 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 TBX20Q9UMR3 447 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 PCDHGC5Q9Y5F6 944 aa12.15□□□□□ -0.46
SHCBP1-207ENST00000569702 FRMD3A2A2Y4 597 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 CSPG5O95196 566 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 EFEMP2O95967 443 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 PIGRP01833 764 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 NMT1P30419 496 aaKnown RBP12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 ABCD1P33897 745 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 LTBRP36941 435 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 KRT85P78386 507 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 MCL1Q07820 350 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 NAB2Q15742 525 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 AAK1Q2M2I8 961 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 ZNF568Q3ZCX4 644 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 XKR4Q5GH76 650 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 RESP18Q5W5W9 173 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 MPZL3Q6UWV2 235 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 ALKAL1Q6UXT8 129 aa12.14□□□□□ -0.47
SHCBP1-207ENST00000569702 ZNF720Q7Z2F6 126 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms