RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 NR3C2P08235 984 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 HSD17B3P37058 310 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 GMPSP49915 693 aaPredicted RBP9.43□□□□□ -0.9
LINC00558-201ENST00000569422 MTERF2Q49AM1 385 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 NOP9Q86U38 636 aaKnown RBP9.43□□□□□ -0.9
LINC00558-201ENST00000569422 IQCKQ8N0W5 287 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 CCDC26Q8TAB7 109 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 TAS1R2Q8TE23 839 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 TATDN2Q93075 761 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 HES6Q96HZ4 224 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 TEPSINQ96N21 525 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 FAM213AQ9BRX8 229 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 IRF2BPLQ9H1B7 796 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 ISCUQ9H1K1 167 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 CNOT7Q9UIV1 285 aaKnown RBP9.43□□□□□ -0.9
LINC00558-201ENST00000569422 TMEM59LQ9UK28 342 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 TBX20Q9UMR3 447 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 STXBP5LQ9Y2K9 1186 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 SNX24Q9Y343 169 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 VWA5AO00534 786 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 SPOPO43791 374 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 PLTPP55058 493 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 DHX9Q08211 1270 aaKnown RBP9.43□□□□□ -0.9
LINC00558-201ENST00000569422 SRLQ86TD4 932 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 NEK9Q8TD19 979 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 PGAP2Q9UHJ9 254 aa9.43□□□□□ -0.9
LINC00558-201ENST00000569422 TLDC2A0PJX2 215 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 ZNF862O60290 1169 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 SEZ6Q53EL9 994 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 LLGL2Q6P1M3 1020 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 SLFN11Q7Z7L1 901 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 WHAMMQ8TF30 809 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 LPAR1Q92633 364 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 C18orf8Q96DM3 657 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 KREMEN1Q96MU8 473 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 SH3GL2Q99962 352 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 STRA6Q9BX79 667 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 KIAA1683Q9H0B3 1180 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 PPANQ9NQ55 473 aaKnown RBP9.42□□□□□ -0.9
LINC00558-201ENST00000569422 PICK1Q9NRD5 415 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 DDX3YO15523 660 aaKnown RBP9.42□□□□□ -0.9
LINC00558-201ENST00000569422 PLA2G6O60733 806 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 UBE4BO95155 1302 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 COMTP21964 271 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 ECHS1P30084 290 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 KCNJ1P48048 391 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 SEC24CP53992 1094 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 IFFO1Q0D2I5 559 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 TNFAIP1Q13829 316 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 DALRD3Q5D0E6 543 aaKnown RBP9.42□□□□□ -0.9
LINC00558-201ENST00000569422 FKBP1CQ5VVH2 108 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 DAB2IPQ5VWQ8 1189 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 EEPD1Q7L9B9 569 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 TMEM143Q96AN5 459 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 ZNF653Q96CK0 615 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 LRRC4CQ9HCJ2 640 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 NENFQ9UMX5 172 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 PCDHA10Q9Y5I2 948 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 RPTORQ8N122 1335 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 A0A0A6YYK5 440 aaPredicted RBP9.42□□□□□ -0.9
LINC00558-201ENST00000569422 NDUFAB1O14561 156 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 NR1D1P20393 614 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 MUTP22033 750 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 GJC1P36383 396 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 ACOT2P49753 483 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 GPC5P78333 572 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 GTF2BQ00403 316 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 DR1Q01658 176 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 PPATQ06203 517 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 TMEM161BQ8NDZ6 487 aa9.42□□□□□ -0.9
LINC00558-201ENST00000569422 DBR1Q9UK59 544 aaKnown RBP9.42□□□□□ -0.9
LINC00558-201ENST00000569422 GOLGA6L10A0A0M3HER8 536 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 TCRBV7S2A1N4TA0A589 114 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 CTNND1O60716 968 aaKnown RBP9.41□□□□□ -0.9
LINC00558-201ENST00000569422 MYZAPP0CAP1 466 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 TNNI1P19237 187 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 TNFRSF8P28908 595 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 BIRC3Q13489 604 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 KIF22Q14807 665 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 UAP1Q16222 522 aaPredicted RBP9.41□□□□□ -0.9
LINC00558-201ENST00000569422 NFIL3Q16649 462 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 ANGEL2Q5VTE6 544 aaKnown RBP9.41□□□□□ -0.9
LINC00558-201ENST00000569422 KRT39Q6A163 491 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 SPOPLQ6IQ16 392 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 SEPT14Q6ZU15 432 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 C4orf19Q8IY42 314 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 EPS8L1Q8TE68 723 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 RUBCNQ92622 972 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 MAGOHBQ96A72 148 aaKnown RBP9.41□□□□□ -0.9
LINC00558-201ENST00000569422 ZNF668Q96K58 619 aaPredicted RBP9.41□□□□□ -0.9
LINC00558-201ENST00000569422 NUP85Q9BW27 656 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 MOV10L1Q9BXT6 1211 aaKnown RBP9.41□□□□□ -0.9
LINC00558-201ENST00000569422 INTUQ9ULD6 942 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
LINC00558-201ENST00000569422 ADGRA3Q8IWK6 1321 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 CCDC188H7C350 402 aa9.41□□□□□ -0.9
LINC00558-201ENST00000569422 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
LINC00558-201ENST00000569422 TMOD1P28289 359 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms