RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 YARSP54577 528 aaKnown RBP9.97□□□□□ -0.81
CHD9-219ENST00000569225 STIM1Q13586 685 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 ZNF658Q5TYW1 1059 aaPredicted RBP9.97□□□□□ -0.81
CHD9-219ENST00000569225 ZBTB33Q86T24 672 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 ZNF598Q86UK7 904 aaKnown RBP9.97□□□□□ -0.81
CHD9-219ENST00000569225 TRIML1Q8N9V2 468 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 KIAA0895Q8NCT3 520 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 URGCPQ8TCY9 931 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 SYAP1Q96A49 352 aaPredicted RBP9.97□□□□□ -0.81
CHD9-219ENST00000569225 MSTO1Q9BUK6 570 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 MRPL9Q9BYD2 267 aaKnown RBP9.97□□□□□ -0.81
CHD9-219ENST00000569225 FGFBP2Q9BYJ0 223 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 TMEM117Q9H0C3 514 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 TOPORSQ9NS56 1045 aaPredicted RBP9.97□□□□□ -0.81
CHD9-219ENST00000569225 KIAA1468Q9P260 1216 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 SCN5AQ14524 2016 aa9.97□□□□□ -0.81
CHD9-219ENST00000569225 SIP14410 1827 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 A0A0B4J269 797 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 DGKIO75912 1065 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 GARTP22102 1010 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 GRM5P41594 1212 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 HTRA4P83105 476 aaPredicted RBP9.96□□□□□ -0.81
CHD9-219ENST00000569225 KCNA1Q09470 495 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 KNOP1Q1ED39 458 aaKnown RBP9.96□□□□□ -0.81
CHD9-219ENST00000569225 TMCO2Q7Z6W1 182 aaPredicted RBP9.96□□□□□ -0.81
CHD9-219ENST00000569225 NELFCDQ8IXH7 590 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 CMTR2Q8IYT2 770 aaKnown RBP9.96□□□□□ -0.81
CHD9-219ENST00000569225 CRIPAKQ8N1N5 446 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 GUF1Q8N442 669 aaKnown RBP9.96□□□□□ -0.81
CHD9-219ENST00000569225 SMG8Q8ND04 991 aaKnown RBP9.96□□□□□ -0.81
CHD9-219ENST00000569225 GLIS3Q8NEA6 775 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 POMGNT1Q8WZA1 660 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 APOL6Q9BWW8 343 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 NXF3Q9H4D5 531 aaKnown RBP9.96□□□□□ -0.81
CHD9-219ENST00000569225 RSAD1Q9HA92 442 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 PARP2Q9UGN5 583 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 GIT1Q9Y2X7 761 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 STYXL1Q9Y6J8 313 aa9.96□□□□□ -0.81
CHD9-219ENST00000569225 ABLIM1O14639 778 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 OGTO15294 1046 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 CLTAP09496 248 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 FGFR1P11362 822 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 ATF7P17544 494 aaPredicted RBP9.96□□□□□ -0.82
CHD9-219ENST00000569225 BTG3Q14201 252 aaPredicted RBP9.96□□□□□ -0.82
CHD9-219ENST00000569225 CCDC183Q5T5S1 534 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 FAM109BQ6ICB4 259 aaPredicted RBP9.96□□□□□ -0.82
CHD9-219ENST00000569225 ARMCX5Q6P1M9 558 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 THNSL1Q8IYQ7 743 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 LRRC43Q8N309 656 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 ERCC4Q92889 916 aaPredicted RBP9.96□□□□□ -0.82
CHD9-219ENST00000569225 LPPQ93052 612 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 ZBTB45Q96K62 511 aaPredicted RBP9.96□□□□□ -0.82
CHD9-219ENST00000569225 ACAP3Q96P50 834 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 KANSL3Q9P2N6 904 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 MAN1B1Q9UKM7 699 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 AGO2Q9UKV8 859 aaKnown RBP9.96□□□□□ -0.82
CHD9-219ENST00000569225 GDAQ9Y2T3 454 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 HES2Q9Y543 173 aa9.96□□□□□ -0.82
CHD9-219ENST00000569225 CARNS1A5YM72 827 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 TBKBP1A7MCY6 615 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 GRXCR1A8MXD5 290 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 ANKRD63C9JTQ0 380 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 RBAK-RBAKDNI3L0D1 243 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 PDXKO00764 312 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 CALUO43852 315 aaPredicted RBP9.95□□□□□ -0.82
CHD9-219ENST00000569225 LDHAP00338 332 aaKnown RBP9.95□□□□□ -0.82
CHD9-219ENST00000569225 RABGGTBP53611 331 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 MORC3Q14149 939 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 SKOR2Q2VWA4 1001 aaPredicted RBP9.95□□□□□ -0.82
CHD9-219ENST00000569225 COBLL1Q53SF7 1204 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 NOMO2Q5JPE7 1267 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 CLLU1OSQ5K130 101 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 SLC39A4Q6P5W5 647 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 AGMOQ6ZNB7 445 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 FIBCD1Q8N539 461 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 SP7Q8TDD2 431 aaPredicted RBP9.95□□□□□ -0.82
CHD9-219ENST00000569225 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 ZNF689Q96CS4 500 aaPredicted RBP9.95□□□□□ -0.82
CHD9-219ENST00000569225 RPS6KC1Q96S38 1066 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 PBX4Q9BYU1 374 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 KIAA1586Q9HCI6 787 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 AGPAT3Q9NRZ7 376 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 TYW1Q9NV66 732 aaKnown RBP9.95□□□□□ -0.82
CHD9-219ENST00000569225 SNTG2Q9NY99 539 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 INPP5FQ9Y2H2 1132 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 TET1Q8NFU7 2136 aa9.95□□□□□ -0.82
CHD9-219ENST00000569225 ARL5CA6NH57 179 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 BIN1O00499 593 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 PSMA7O14818 248 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 OFD1O75665 1012 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 RECQL4O94761 1208 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 AKAP5P24588 427 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 HOXD13P35453 343 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 OSTNP61366 133 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 POU5F1Q01860 360 aaKnown RBP9.94□□□□□ -0.82
CHD9-219ENST00000569225 RNASELQ05823 741 aaKnown RBP9.94□□□□□ -0.82
CHD9-219ENST00000569225 KLHL40Q2TBA0 621 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 TIFAQ96CG3 184 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 TSG101Q99816 390 aa9.94□□□□□ -0.82
CHD9-219ENST00000569225 RNF39Q9H2S5 420 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms