RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 AASDHQ4L235 1098 aaPredicted RBP9.71□□□□□ -0.86
SMG1-216ENST00000569122 N4BP2L1Q5TBK1 243 aaPredicted RBP9.71□□□□□ -0.86
SMG1-216ENST00000569122 JAKMIP3Q5VZ66 844 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 FUT10Q6P4F1 479 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 MICU3Q86XE3 530 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 C12orf50Q8NA57 414 aaPredicted RBP9.71□□□□□ -0.86
SMG1-216ENST00000569122 BICD2Q8TD16 824 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 CRYGNQ8WXF5 182 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 SLC7A3Q8WY07 619 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 TEKT3Q9BXF9 490 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 C6orf50Q9HD87 102 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
SMG1-216ENST00000569122 ADAM28Q9UKQ2 775 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 POLIQ9UNA4 740 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 GIT1Q9Y2X7 761 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 LOXHD1Q8IVV2 1947 aa9.71□□□□□ -0.86
SMG1-216ENST00000569122 USP24Q9UPU5 2620 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 DENND4AQ7Z401 1863 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 ESYT2A0FGR8 921 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 ARL5CA6NH57 179 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 SOBPA7XYQ1 873 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 B4GALT3O60512 393 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 ERLIN2O94905 339 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 C8AP07357 584 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 ELAVL2Q12926 359 aaKnown RBP9.7□□□□□ -0.86
SMG1-216ENST00000569122 DRP2Q13474 957 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 PABPC1LQ4VXU2 614 aaKnown RBP9.7□□□□□ -0.86
SMG1-216ENST00000569122 TYW1BQ6NUM6 668 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 REXO1Q8N1G1 1221 aaKnown RBP9.7□□□□□ -0.86
SMG1-216ENST00000569122 PSPC1Q8WXF1 523 aaKnown RBP9.7□□□□□ -0.86
SMG1-216ENST00000569122 MAP4K1Q92918 833 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 IRF7Q92985 503 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 ELSPBP1Q96BH3 223 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 MSANTD3Q96H12 275 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 LOXL4Q96JB6 756 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 TRPV5Q9NQA5 729 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 FBXW11Q9UKB1 542 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 COL4A3BPQ9Y5P4 624 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 SF3B1O75533 1304 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMG1-216ENST00000569122 LAMA4Q16363 1823 aa9.7□□□□□ -0.86
SMG1-216ENST00000569122 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 DDX11L8A8MPP1 907 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 TDGF1P13385 188 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 USP11P51784 963 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 AFF1P51825 1210 aaKnown RBP9.69□□□□□ -0.86
SMG1-216ENST00000569122 MLLT6P55198 1093 aaPredicted RBP9.69□□□□□ -0.86
SMG1-216ENST00000569122 FZD5Q13467 585 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 LRRC32Q14392 662 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 RTN1Q16799 776 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 LRCH2Q5VUJ6 765 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 NOTUMQ6P988 496 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 CEP68Q76N32 757 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 MIER3Q7Z3K6 550 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 LONP2Q86WA8 852 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 GLYCTKQ8IVS8 523 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 SPEM1Q8N4L4 309 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 KDF1Q8NAX2 398 aaPredicted RBP9.69□□□□□ -0.86
SMG1-216ENST00000569122 ST13P5Q8NFI4 369 aaPredicted RBP9.69□□□□□ -0.86
SMG1-216ENST00000569122 EXOC6Q8TAG9 804 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 ITFG1Q8TB96 612 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 FAM3CQ92520 227 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 GAD1Q99259 594 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 KXD1Q9BQD3 176 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 TTPALQ9BTX7 342 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 TRIM6Q9C030 488 aaPredicted RBP9.69□□□□□ -0.86
SMG1-216ENST00000569122 ZMYND12Q9H0C1 365 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 IL25Q9H293 177 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 BRD9Q9H8M2 597 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 LMAN1LQ9HAT1 526 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 IFT122Q9HBG6 1241 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 AVENQ9NQS1 362 aaPredicted RBP9.69□□□□□ -0.86
SMG1-216ENST00000569122 HEBP1Q9NRV9 189 aa9.69□□□□□ -0.86
SMG1-216ENST00000569122 DAXXQ9UER7 740 aaPredicted RBP9.69□□□□□ -0.86
SMG1-216ENST00000569122 NDRG2Q9UN36 371 aaKnown RBP9.69□□□□□ -0.86
SMG1-216ENST00000569122 MRPS23Q9Y3D9 190 aaKnown RBP9.69□□□□□ -0.86
SMG1-216ENST00000569122 PKD1L2Q7Z442 2459 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 FANCMQ8IYD8 2048 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 ZMYM2Q9UBW7 1377 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 CNTNAP5Q8WYK1 1306 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 ZNF197O14709 1029 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 CCL16O15467 120 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 CHMP2AO43633 222 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 GDF9O60383 454 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 PAPSS2O95340 614 aaPredicted RBP9.68□□□□□ -0.86
SMG1-216ENST00000569122 SRGAP2CP0DJJ0 459 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 CHMLP26374 656 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 HOXA11P31270 313 aaPredicted RBP9.68□□□□□ -0.86
SMG1-216ENST00000569122 MLH1P40692 756 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 PSMC5P62195 406 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 AXDND1Q5T1B0 1012 aaPredicted RBP9.68□□□□□ -0.86
SMG1-216ENST00000569122 UNQ6494/PRO21346Q6UXR6 183 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 NPAS3Q8IXF0 933 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 TCP11Q8WWU5 503 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 PIK3R5Q8WYR1 880 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 TRMT61BQ9BVS5 477 aaKnown RBP9.68□□□□□ -0.86
SMG1-216ENST00000569122 C22orf23Q9BZE7 217 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 GPR62Q9BZJ7 368 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 ZFP14Q9HCL3 533 aa9.68□□□□□ -0.86
SMG1-216ENST00000569122 RALYQ9UKM9 306 aaKnown RBP9.68□□□□□ -0.86
SMG1-216ENST00000569122 ZMIZ1Q9ULJ6 1067 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms