RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 UBN1Q9NPG3 1134 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 KLK14Q9P0G3 267 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 STK39Q9UEW8 545 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 FBXL21Q9UKT6 434 aa17.26■□□□□ 0.35
NME3-211ENST00000568561 CCDC195A0A1B0GUA6 201 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 PI15O43692 258 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 NPTXRO95502 500 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 EFEMP2O95967 443 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 NPR3P17342 541 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 RPL17P18621 184 aaKnown RBP17.25■□□□□ 0.35
NME3-211ENST00000568561 GLRA2P23416 452 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 AXLP30530 894 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 CALCRLQ16602 461 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 FRMD5Q7Z6J6 570 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 PALB2Q86YC2 1186 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 SIX5Q8N196 739 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 PIGOQ8TEQ8 1089 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 CCDC51Q96ER9 411 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 HSD17B14Q9BPX1 270 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 GPRC5CQ9NQ84 441 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 DUSP12Q9UNI6 340 aa17.25■□□□□ 0.35
NME3-211ENST00000568561 CLUHO75153 1309 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 POTEMA6NI47 508 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 USO1O60763 962 aaKnown RBP17.24■□□□□ 0.35
NME3-211ENST00000568561 DGAT1O75907 488 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 CFHP08603 1231 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 ARL2P36404 184 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 TXKP42681 527 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 RARRES1P49788 294 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 CLCN5P51795 746 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 MAEAQ7L5Y9 396 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 IFNLR1Q8IU57 520 aaPredicted RBP17.24■□□□□ 0.35
NME3-211ENST00000568561 GSTCDQ8NEC7 633 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 ST13P5Q8NFI4 369 aaPredicted RBP17.24■□□□□ 0.35
NME3-211ENST00000568561 CMASQ8NFW8 434 aaPredicted RBP17.24■□□□□ 0.35
NME3-211ENST00000568561 SMG7Q92540 1137 aaKnown RBP17.24■□□□□ 0.35
NME3-211ENST00000568561 WASF1Q92558 559 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 ZNF707Q96C28 371 aaPredicted RBP17.24■□□□□ 0.35
NME3-211ENST00000568561 GPR62Q9BZJ7 368 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 TTC12Q9H892 705 aaPredicted RBP17.24■□□□□ 0.35
NME3-211ENST00000568561 RXFP1Q9HBX9 757 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 PCDHA12Q9UN75 941 aa17.24■□□□□ 0.35
NME3-211ENST00000568561 PRR23AA6NEV1 266 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 BTBD18B2RXH4 712 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 PROB1E7EW31 1015 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 NEMFO60524 1076 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 JAK2O60674 1132 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 LYPLA2O95372 231 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 AOC1P19801 751 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 NBL1P41271 181 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 DSG1Q02413 1049 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 NCBP1Q09161 790 aaKnown RBP17.23■□□□□ 0.35
NME3-211ENST00000568561 PCBP1Q15365 356 aaKnown RBP eCLIP17.23■□□□□ 0.35
NME3-211ENST00000568561 ME3Q16798 604 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 FUT10Q6P4F1 479 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 SLC27A1Q6PCB7 646 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 RIN2Q8WYP3 895 aaPredicted RBP17.23■□□□□ 0.35
NME3-211ENST00000568561 MYADMQ96S97 322 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 PAAF1Q9BRP4 392 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 COLEC11Q9BWP8 271 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 BRMS1Q9HCU9 246 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 WDR6Q9NNW5 1121 aaKnown RBP17.23■□□□□ 0.35
NME3-211ENST00000568561 ANKEF1Q9NU02 776 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 PARP2Q9UGN5 583 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 SSX2IPQ9Y2D8 614 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 GIT1Q9Y2X7 761 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 VWA8A3KMH1 1905 aa17.23■□□□□ 0.35
NME3-211ENST00000568561 LRRIQ4A6NIV6 560 aa17.22■□□□□ 0.35
NME3-211ENST00000568561 TGM5O43548 720 aa17.22■□□□□ 0.35
NME3-211ENST00000568561 NR1I2O75469 434 aa17.22■□□□□ 0.35
NME3-211ENST00000568561 DIS3L2Q8IYB7 885 aaKnown RBP17.22■□□□□ 0.35
NME3-211ENST00000568561 HASPINQ8TF76 798 aa17.22■□□□□ 0.35
NME3-211ENST00000568561 GTF3C6Q969F1 213 aa17.22■□□□□ 0.35
NME3-211ENST00000568561 CHST7Q9NS84 486 aa17.22■□□□□ 0.35
NME3-211ENST00000568561 ADAM28Q9UKQ2 775 aa17.22■□□□□ 0.35
NME3-211ENST00000568561 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 ZNF292O60281 2723 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 TRIP11Q15643 1979 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 TTLL13PA6NNM8 815 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 ATP2B1P20020 1258 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 POU5F1BQ06416 359 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 GRIK3Q13003 919 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 ELMSAN1Q6PJG2 1045 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 POTEGQ6S5H5 508 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 PRSS55Q6UWB4 352 aaPredicted RBP17.21■□□□□ 0.35
NME3-211ENST00000568561 GET4Q7L5D6 327 aaPredicted RBP17.21■□□□□ 0.35
NME3-211ENST00000568561 HACE1Q8IYU2 909 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
NME3-211ENST00000568561 SNX27Q96L92 541 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 CXCL16Q9H2A7 254 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 TMEM60Q9H2L4 133 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 PIDD1Q9HB75 910 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 IGSF9Q9P2J2 1179 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 CA14Q9ULX7 337 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 USP20Q9Y2K6 914 aa17.21■□□□□ 0.35
NME3-211ENST00000568561 EP300Q09472 2414 aaPredicted RBP17.2■□□□□ 0.34
NME3-211ENST00000568561 COL4A3Q01955 1670 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 KRBA1A5PL33 1030 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 CASTOR2A6NHX0 329 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms