RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 ASAP3Q8TDY4 903 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 LRRC15Q8TF66 581 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 GLT1D1Q96MS3 346 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 SLC8A3P57103 927 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 SEPT7Q16181 437 aaKnown RBP13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 ZNF667Q5HYK9 610 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 ALKBH5Q6P6C2 394 aaKnown RBP13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 DCUN1D2Q6PH85 259 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 TRIM59Q8IWR1 403 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 CRYGNQ8WXF5 182 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 ACAP3Q96P50 834 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 PLVAPQ9BX97 442 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 IKZF4Q9H2S9 585 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 MYO6Q9UM54 1294 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 USP27XA6NNY8 438 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 ERLIN1O75477 346 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 PGK1P00558 417 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 ZNF699Q32M78 642 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 XPNPEP3Q9NQH7 507 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 PCDHA13Q9Y5I0 950 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 AOC2O75106 756 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 GLRA2P23416 452 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 MYO1EQ12965 1108 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 SMC1AQ14683 1233 aaKnown RBP13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 MFSD10Q14728 455 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 NFRKBQ6P4R8 1299 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 CEP112Q8N8E3 955 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 TRIM58Q8NG06 486 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 POP1Q99575 1024 aaKnown RBP13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 EDEM3Q9BZQ6 932 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 GOLGA4Q13439 2230 aaKnown RBP13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 IGF2BP3O00425 579 aaKnown RBP eCLIP13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 ADCY3O60266 1144 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 TOM1L1O75674 476 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 IFFO1Q0D2I5 559 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 PPP2R5DQ14738 602 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 PEX26Q7Z412 305 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 KIF12Q96FN5 646 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 FAM193BQ96PV7 902 aaPredicted RBP13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 TTLL3Q9Y4R7 772 aa13.08□□□□□ -0.32
TMEM170A-205ENST00000568559 TLDC2A0PJX2 215 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 GOLGA6L10A6NI86 522 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 KBTBD13C9JR72 458 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 ARIH2O95376 493 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 GARTP22102 1010 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 CST9Q5W186 159 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 GJB7Q6PEY0 223 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 SLC35F6Q8N357 371 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 CARD6Q9BX69 1037 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 APEX2Q9UBZ4 518 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 TRIM17Q9Y577 477 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 ANKRD63C9JTQ0 380 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 SCP2P22307 547 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 TMEM270Q6UE05 265 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 OSMRQ99650 979 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 RAB20Q9NX57 234 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 INPP5FQ9Y2H2 1132 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 ADGRG1Q9Y653 693 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 LOC102724159A0A0B4J2E5 919 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 KIF4AO95239 1232 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 RDXP35241 583 aaKnown RBP13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 PWP2Q15269 919 aaKnown RBP13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 NAA35Q5VZE5 725 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 CXCL17Q6UXB2 119 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 LRRC55Q6ZSA7 311 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 MAATS1Q7Z4T9 603 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 PPTC7Q8NI37 304 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 DNAJB3Q8WWF6 145 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 ZBTB45Q96K62 511 aaPredicted RBP13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 DIS3Q9Y2L1 958 aaKnown RBP13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 LRRC10BA6NIK2 292 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 ENC1O14682 589 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 MAFO75444 373 aaPredicted RBP13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 GJB1P08034 283 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 VPS41P49754 854 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 PSEN2P49810 448 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 MAP4K3Q8IVH8 894 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 LENG1Q96BZ8 264 aaPredicted RBP13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 PI4K2AQ9BTU6 479 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 MORF4L1Q9UBU8 362 aa13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 MAFBQ9Y5Q3 323 aaPredicted RBP13.07□□□□□ -0.32
TMEM170A-205ENST00000568559 ASTN1O14525 1302 aa13.06□□□□□ -0.32
TMEM170A-205ENST00000568559 SYNGAP1Q96PV0 1343 aa13.06□□□□□ -0.32
TMEM170A-205ENST00000568559 RPS6KA5O75582 802 aa13.06□□□□□ -0.32
TMEM170A-205ENST00000568559 ELNP15502 786 aa13.06□□□□□ -0.32
TMEM170A-205ENST00000568559 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
TMEM170A-205ENST00000568559 GTF2BQ00403 316 aa13.06□□□□□ -0.32
TMEM170A-205ENST00000568559 CCL14Q16627 93 aa13.06□□□□□ -0.32
TMEM170A-205ENST00000568559 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms