RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 TMEM119Q4V9L6 283 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 ARSHQ5FYA8 562 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 NOMO2Q5JPE7 1267 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 NT5DC1Q5TFE4 455 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 ARL6IP4Q66PJ3 421 aaKnown RBP10.49□□□□□ -0.73
SF3B3-211ENST00000568291 PDE12Q6L8Q7 609 aaKnown RBP10.49□□□□□ -0.73
SF3B3-211ENST00000568291 TRIM67Q6ZTA4 783 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 MRPL10Q7Z7H8 261 aaKnown RBP10.49□□□□□ -0.73
SF3B3-211ENST00000568291 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-211ENST00000568291 SUGP1Q8IWZ8 645 aaKnown RBP10.49□□□□□ -0.73
SF3B3-211ENST00000568291 LRRC43Q8N309 656 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 PRSS33Q8NF86 280 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 RASSF8Q8NHQ8 419 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 AUTS2Q8WXX7 1259 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 SUSD6Q92537 303 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 RPGRIP1Q96KN7 1286 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 GAD1Q99259 594 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 FZD8Q9H461 694 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 NRDE2Q9H7Z3 1164 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 ENTPD7Q9NQZ7 604 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 PARP2Q9UGN5 583 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 LZTS1Q9Y250 596 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 ARID2Q68CP9 1835 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 A0A1B0GUA9 196 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 HOXA2O43364 376 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 PRKCBP05771 671 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 PLCG1P19174 1290 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 MUTP22033 750 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 CA8P35219 290 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 PPM1AP35813 382 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 MLH1P40692 756 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 SLC11A1P49279 550 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 SCNN1GP51170 649 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 SLC12A3P55017 1021 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 POU5F1BQ06416 359 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 NCBP1Q09161 790 aaKnown RBP10.48□□□□□ -0.73
SF3B3-211ENST00000568291 PRPF4BQ13523 1007 aaKnown RBP10.48□□□□□ -0.73
SF3B3-211ENST00000568291 TPRNQ4KMQ1 711 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 HYIQ5T013 277 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 CDCA2Q69YH5 1023 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-211ENST00000568291 LLGL2Q6P1M3 1020 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 NOTUMQ6P988 496 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 GLB1LQ6UWU2 654 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 TAS1R3Q7RTX0 852 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 BMP8AQ7Z5Y6 402 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 ZBTB33Q86T24 672 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 GPBP1Q86WP2 473 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 ZBTB8OSQ8IWT0 167 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 SYT2Q8N9I0 419 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-211ENST00000568291 MRPS27Q92552 414 aaKnown RBP10.48□□□□□ -0.73
SF3B3-211ENST00000568291 PBXIP1Q96AQ6 731 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 PGBD4Q96DM1 585 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 IFT74Q96LB3 600 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 ZNF558Q96NG5 402 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 TCF25Q9BQ70 676 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 TRAIPQ9BWF2 469 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 TRIM6Q9C030 488 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-211ENST00000568291 CCDC113Q9H0I3 377 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 ZHX3Q9H4I2 956 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 PDZD7Q9H5P4 517 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 RSAD1Q9HA92 442 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 BLOC1S4Q9NUP1 217 aa10.48□□□□□ -0.73
SF3B3-211ENST00000568291 TRIOO75962 3097 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 C2orf16Q68DN1 1984 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 A0A087X0B3 334 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 ARL5CA6NH57 179 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 HIDE1A8MVS5 230 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 SP100P23497 879 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 IGFBP6P24592 240 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 LONP1P36776 959 aaKnown RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 NAMPTP43490 491 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 ALDH7A1P49419 539 aaKnown RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 RAB27AP51159 221 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 PTPN5P54829 565 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 OSTNP61366 133 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 PLCB3Q01970 1234 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 SIGLEC14Q08ET2 396 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 MAPK6Q16659 721 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 ANKRD54Q6NXT1 300 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 SLC27A1Q6PCB7 646 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 SLC39A11Q8N1S5 342 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 FBXL6Q8N531 539 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 KIFAP3Q92845 792 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 CALML4Q96GE6 196 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 ZBTB45Q96K62 511 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 TARS2Q9BW92 718 aaKnown RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 APOL5Q9BWW9 433 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 NFKBIZQ9BYH8 718 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 KMT5AQ9NQR1 393 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 PRMT7Q9NVM4 692 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 SNTG2Q9NY99 539 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 SPG21Q9NZD8 308 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 PUF60Q9UHX1 559 aaKnown RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 GDAQ9Y2T3 454 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 PRG3Q9Y2Y8 225 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-211ENST00000568291 STK24Q9Y6E0 443 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 PLXNA3P51805 1871 aa10.47□□□□□ -0.73
SF3B3-211ENST00000568291 K7ERI5 159 aa10.46□□□□□ -0.73
SF3B3-211ENST00000568291 ACKR2O00590 384 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms