RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 RAG1P15918 1043 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 GARTP22102 1010 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 ANXA13P27216 316 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 ARL2P36404 184 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 CETN1Q12798 172 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 MTF1Q14872 753 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 EEPD1Q7L9B9 569 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 FBXO16Q8IX29 292 aaPredicted RBP15.9■□□□□ 0.14
COMMD4-221ENST00000567935 GLG1Q92896 1179 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 SPATA33Q96N06 139 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 CEP89Q96ST8 783 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 KIAA1586Q9HCI6 787 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 HSPBP1Q9NZL4 362 aa15.9■□□□□ 0.14
COMMD4-221ENST00000567935 KIF5CO60282 957 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 GPR37L1O60883 481 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 MAFO75444 373 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-221ENST00000567935 PIGRP01833 764 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 FMO5P49326 533 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 STRN3Q13033 797 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-221ENST00000567935 ARHGAP29Q52LW3 1261 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 SFMBT2Q5VUG0 894 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 IER5Q5VY09 327 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 TRIM65Q6PJ69 517 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 RRAGAQ7L523 313 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 DPP9Q86TI2 863 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 KSR1Q8IVT5 923 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 EHBP1Q8NDI1 1231 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 CCDC42Q96M95 316 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 CHP1Q99653 195 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.13
COMMD4-221ENST00000567935 SH2D3AQ9BRG2 576 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 DESI2Q9BSY9 194 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 GANQ9H2C0 597 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 HAUS4Q9H6D7 363 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 TMEM134Q9H6X4 195 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 NHEJ1Q9H9Q4 299 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-221ENST00000567935 LUC7LQ9NQ29 371 aaKnown RBP15.89■□□□□ 0.13
COMMD4-221ENST00000567935 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-221ENST00000567935 AIPL1Q9NZN9 384 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 TELO2Q9Y4R8 837 aa15.89■□□□□ 0.13
COMMD4-221ENST00000567935 BZW2Q9Y6E2 419 aaKnown RBP15.89■□□□□ 0.13
COMMD4-221ENST00000567935 LRRC53A6NM62 1247 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 EPHB6O15197 1021 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 HBP1O60381 514 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 SORBS3O60504 671 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 NOL4O94818 638 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 IGHA2P01877 340 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 SERPING1P05155 500 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 PON1P27169 355 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 GTF2F1P35269 517 aaKnown RBP eCLIP15.88■□□□□ 0.13
COMMD4-221ENST00000567935 EFNA5P52803 228 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 POLR2FP61218 127 aaKnown RBP15.88■□□□□ 0.13
COMMD4-221ENST00000567935 SPA17Q15506 151 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 KLHDC7AQ5VTJ3 777 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 SLFN12LQ6IEE8 588 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 TRMT1LQ7Z2T5 733 aaKnown RBP15.88■□□□□ 0.13
COMMD4-221ENST00000567935 DEPTORQ8TB45 409 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 BSNDQ8WZ55 320 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 TSGA10Q9BZW7 698 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 ABHD16BQ9H3Z7 469 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 GCNT4Q9P109 453 aa15.88■□□□□ 0.13
COMMD4-221ENST00000567935 CHD7Q9P2D1 2997 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 LCA5LO95447 670 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 HOXC6P09630 235 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 UCHL3P15374 230 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 GTF2H1P32780 548 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 VAMP7P51809 220 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 MYL7Q01449 175 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 TUBB2AQ13885 445 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 MXD4Q14582 209 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-221ENST00000567935 HSDL1Q3SXM5 330 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 TAPT1Q6NXT6 567 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 SYT10Q6XYQ8 523 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 MICALL1Q8N3F8 863 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 CCDC155Q8N6L0 562 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 PPTC7Q8NI37 304 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 TMC2Q8TDI7 906 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 ZNF592Q92610 1267 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 MAML3Q96JK9 1138 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 FBXL18Q96ME1 805 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 CBWD1Q9BRT8 395 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 CRACR2AQ9BSW2 395 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 TUBB2BQ9BVA1 445 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 TSPYL2Q9H2G4 693 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-221ENST00000567935 DEF6Q9H4E7 631 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 ERAP1Q9NZ08 941 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 SIP14410 1827 aa15.87■□□□□ 0.13
COMMD4-221ENST00000567935 IGKV6-21A0A0C4DH24 114 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 HNRNPDLO14979 420 aaKnown RBP15.86■□□□□ 0.13
COMMD4-221ENST00000567935 PQBP1O60828 265 aaKnown RBP15.86■□□□□ 0.13
COMMD4-221ENST00000567935 CCDC172P0C7W6 258 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 GLRA2P23416 452 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 GNG11P61952 73 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 ARHGAP1Q07960 439 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 ASIC2Q16515 512 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 ZNF484Q5JVG2 852 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 IQSEC1Q6DN90 963 aa15.86■□□□□ 0.13
COMMD4-221ENST00000567935 PSPC1Q8WXF1 523 aaKnown RBP15.86■□□□□ 0.13
COMMD4-221ENST00000567935 SPAG5Q96R06 1193 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms