RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 ZNF267Q14586 743 aaPredicted RBP6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 UAP1L1Q3KQV9 507 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 MFSD14BQ5SR56 506 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 PRAMEF14Q5SWL7 426 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 USP45Q70EL2 814 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 LIMS2Q7Z4I7 341 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 TAX1BP1Q86VP1 789 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 MIER2Q8N344 545 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 HPS3Q969F9 1004 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 RUNDC1Q96C34 613 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 CEP95Q96GE4 821 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 PCDHA13Q9Y5I0 950 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 SLC30A1Q9Y6M5 507 aa6.33□□□□□ -1.4
SHCBP1-206ENST00000567698 ZMYM3Q14202 1370 aa6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 ECHS1P30084 290 aa6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 CYP2C19P33261 490 aa6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 DUSP2Q05923 314 aa6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 MRPL49Q13405 166 aaKnown RBP6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 CSRP2Q16527 193 aa6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 DNERQ8NFT8 737 aa6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 NSUN6Q8TEA1 469 aaKnown RBP6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 KAT5Q92993 513 aa6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 WWC2-AS2Q96NR7 200 aa6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 TAAR9Q96RI9 348 aa6.32□□□□□ -1.4
SHCBP1-206ENST00000567698 ARID1BQ8NFD5 2236 aaPredicted RBP6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 PATE3B3GLJ2 98 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 NRP1O14786 923 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 ENDOD1O94919 500 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 ITGB3P05106 788 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 ALOX15P16050 662 aaPredicted RBP6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 VCAM1P19320 739 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 FPR1P21462 350 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 PCSK1P29120 753 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 MTM1Q13496 603 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 GTF2H3Q13889 308 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 MLC1Q15049 377 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 FAM214AQ32MH5 1076 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 UBXN11Q5T124 520 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 GJC2Q5T442 439 aaPredicted RBP6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 KRT40Q6A162 431 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 ZNF572Q7Z3I7 529 aaPredicted RBP6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 C14orf80Q86SX3 495 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 FUKQ8N0W3 1084 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 MYO1HQ8N1T3 1032 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 PQLC1Q8N2U9 271 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 FBXO18Q8NFZ0 1043 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 TTC8Q8TAM2 541 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 SLC35G2Q8TBE7 412 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 RAB24Q969Q5 203 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 HDAC10Q969S8 669 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 BORCS6Q96GS4 357 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 MRGPRX4Q96LA9 322 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 C12orf65Q9H3J6 166 aaKnown RBP6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 NELFAQ9H3P2 528 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 LDAHQ9H6V9 325 aa6.31□□□□□ -1.4
SHCBP1-206ENST00000567698 A0A1W2PRX2 142 aa6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 RAD17O75943 681 aa6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 FOXL1Q12952 345 aa6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 FZD5Q13467 585 aa6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 Q6ZSN1 163 aa6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 MDM1Q8TC05 714 aa6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 IFI44Q8TCB0 444 aa6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 DIS3LQ8TF46 1054 aaKnown RBP6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 C7orf25Q9BPX7 421 aa6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 LSM14BQ9BX40 385 aaKnown RBP6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 PLA2G3Q9NZ20 509 aa6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 HECAQ9UBI9 543 aaPredicted RBP6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 SAP30BPQ9UHR5 308 aaKnown RBP6.3□□□□□ -1.4
SHCBP1-206ENST00000567698 SGTAO43765 313 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 CT47B1P0C2W7 299 aaPredicted RBP6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 GZMKP49863 264 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 CDC42EP1Q00587 391 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 FBLN7Q53RD9 439 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 CYB5RLQ6IPT4 315 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 FAM111BQ6SJ93 734 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 RHOT1Q8IXI2 618 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 DCBLD1Q8N8Z6 715 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 MVB12AQ96EY5 273 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 IL17RAQ96F46 866 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 TCF25Q9BQ70 676 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 CD248Q9HCU0 757 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 NCDNQ9UBB6 729 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 RAPGEFL1Q9UHV5 662 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 ZFR2Q9UPR6 939 aaKnown RBP6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 JAG2Q9Y219 1238 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 SH3BP1Q9Y3L3 701 aa6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 CFAP20Q9Y6A4 193 aaKnown RBP6.29□□□□□ -1.4
SHCBP1-206ENST00000567698 ZNF536O15090 1300 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 NPEPPSL1A6NEC2 478 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 HOXA3O43365 443 aaPredicted RBP6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 AP1G1O43747 822 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 NPEPPSP55786 919 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 APBA1Q02410 837 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 GALEQ14376 348 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 ICAM4Q14773 271 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 GRM7Q14831 915 aa6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 IFIT1BQ5T764 474 aaKnown RBP6.28□□□□□ -1.4
SHCBP1-206ENST00000567698 C1QL3Q5VWW1 255 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms