RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PPP4R3CPQ6ZMV5 832 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 CMASQ8NFW8 434 aaPredicted RBP20.6■□□□□ 0.89
LINC01238-205ENST00000567549 PIGOQ8TEQ8 1089 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 BCL7CQ8WUZ0 217 aaPredicted RBP20.6■□□□□ 0.89
LINC01238-205ENST00000567549 ASIC4Q96FT7 647 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 CPB2Q96IY4 423 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 APOL6Q9BWW8 343 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 EIF2AQ9BY44 585 aaKnown RBP20.6■□□□□ 0.89
LINC01238-205ENST00000567549 RHOBTB2Q9BYZ6 727 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 A0A1B0GUA9 196 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 POTEMA6NI47 508 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 JAK2O60674 1132 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 RPA1P27694 616 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 SCNN1GP51170 649 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 FOSBP53539 338 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 MAPK6Q16659 721 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 USP41Q3LFD5 358 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 ASAP3Q8TDY4 903 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 IFT74Q96LB3 600 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 MFSD1Q9H3U5 465 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 PLEKHA4Q9H4M7 779 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 PARP2Q9UGN5 583 aa20.59■□□□□ 0.89
LINC01238-205ENST00000567549 PHLPP2Q6ZVD8 1323 aa20.58■□□□□ 0.89
LINC01238-205ENST00000567549 C2CD2LO14523 706 aa20.58■□□□□ 0.89
LINC01238-205ENST00000567549 NPTXRO95502 500 aa20.58■□□□□ 0.89
LINC01238-205ENST00000567549 EFNA5P52803 228 aa20.58■□□□□ 0.89
LINC01238-205ENST00000567549 FAM187BQ17R55 369 aa20.58■□□□□ 0.89
LINC01238-205ENST00000567549 PDXDC1Q6P996 788 aa20.58■□□□□ 0.89
LINC01238-205ENST00000567549 CATSPER3Q86XQ3 398 aa20.58■□□□□ 0.89
LINC01238-205ENST00000567549 C12orf76Q8N812 135 aaPredicted RBP20.58■□□□□ 0.89
LINC01238-205ENST00000567549 DEPTORQ8TB45 409 aa20.58■□□□□ 0.89
LINC01238-205ENST00000567549 SF3B1O75533 1304 aaKnown RBP eCLIP20.57■□□□□ 0.88
LINC01238-205ENST00000567549 AVPR2P30518 371 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 NAMPTP43490 491 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 DSG1Q02413 1049 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 ELAVL2Q12926 359 aaKnown RBP20.57■□□□□ 0.88
LINC01238-205ENST00000567549 PRPF4BQ13523 1007 aaKnown RBP20.57■□□□□ 0.88
LINC01238-205ENST00000567549 AMHR2Q16671 573 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 CDCA2Q69YH5 1023 aaPredicted RBP20.57■□□□□ 0.88
LINC01238-205ENST00000567549 VN1R3Q9BXE9 311 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 NXF3Q9H4D5 531 aaKnown RBP20.57■□□□□ 0.88
LINC01238-205ENST00000567549 RXFP1Q9HBX9 757 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 MAN1C1Q9NR34 630 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 ADAM28Q9UKQ2 775 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 HES2Q9Y543 173 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 ZDBF2Q9HCK1 2354 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 MYO10Q9HD67 2058 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 TRIOO75962 3097 aa20.57■□□□□ 0.88
LINC01238-205ENST00000567549 LILRB3O75022 631 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 SPATA31C1P0DKV0 1188 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 TTC38Q5R3I4 469 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 PADI6Q6TGC4 694 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 CCDC83Q8IWF9 413 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 KIFAP3Q92845 792 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 ZFP42Q96MM3 310 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 MARCH5Q9NX47 278 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 FNIP2Q9P278 1114 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 IGSF9Q9P2J2 1179 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 LIMD1Q9UGP4 676 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 DENND4AQ7Z401 1863 aa20.56■□□□□ 0.88
LINC01238-205ENST00000567549 LAD1O00515 517 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 TEX28O15482 410 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 B4GALT3O60512 393 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 TADA2AO75478 443 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 WEE2P0C1S8 567 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 CYP11B2P19099 503 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 AFF1P51825 1210 aaKnown RBP20.55■□□□□ 0.88
LINC01238-205ENST00000567549 TUSC3Q13454 348 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 DCAF4L1Q3SXM0 396 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 FUT10Q6P4F1 479 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 MAEAQ7L5Y9 396 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 NOSTRINQ8IVI9 506 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 RNF168Q8IYW5 571 aaPredicted RBP20.55■□□□□ 0.88
LINC01238-205ENST00000567549 FBXO18Q8NFZ0 1043 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 NXPE3Q969Y0 559 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 TMEM60Q9H2L4 133 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 FZD8Q9H461 694 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 PIDD1Q9HB75 910 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 ZDHHC7Q9NXF8 308 aa20.55■□□□□ 0.88
LINC01238-205ENST00000567549 KMT2EQ8IZD2 1858 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 DTNBO60941 627 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 THP07101 528 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 AKAP5P24588 427 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 CCT6AP40227 531 aaKnown RBP20.54■□□□□ 0.88
LINC01238-205ENST00000567549 GUCY1B3Q02153 619 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 TDGQ13569 410 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 PDIA5Q14554 519 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 KIAA0319Q5VV43 1072 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 RNF39Q9H2S5 420 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 CHST7Q9NS84 486 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 KCNG1Q9UIX4 513 aa20.54■□□□□ 0.88
LINC01238-205ENST00000567549 CCDC195A0A1B0GUA6 201 aa20.53■□□□□ 0.88
LINC01238-205ENST00000567549 ACKR2O00590 384 aa20.53■□□□□ 0.88
LINC01238-205ENST00000567549 B4GALT5O43286 388 aa20.53■□□□□ 0.88
LINC01238-205ENST00000567549 MED24O75448 989 aa20.53■□□□□ 0.88
LINC01238-205ENST00000567549 BRD1O95696 1058 aa20.53■□□□□ 0.88
LINC01238-205ENST00000567549 PRKCBP05771 671 aa20.53■□□□□ 0.88
LINC01238-205ENST00000567549 FXR2P51116 673 aaKnown RBP eCLIP20.53■□□□□ 0.88
LINC01238-205ENST00000567549 HSP90AA2PQ14568 343 aaPredicted RBP20.53■□□□□ 0.88
LINC01238-205ENST00000567549 ZNF174Q15697 407 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms