RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 C16orf86Q6ZW13 317 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 ADGRG3Q86Y34 549 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 PPM1KQ8N3J5 372 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 CPEB3Q8NE35 698 aaKnown RBP4.77□□□□□ -1.65
CDH1-211ENST00000567320 OR14C36Q8NHC7 312 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 TFAP2CQ92754 450 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 NINJ1Q92982 152 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 RNF181Q9P0P0 153 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 EVLQ9UI08 416 aaPredicted RBP4.77□□□□□ -1.65
CDH1-211ENST00000567320 PRSS50Q9UI38 385 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 USP15Q9Y4E8 981 aaPredicted RBP4.77□□□□□ -1.65
CDH1-211ENST00000567320 PPP2R3BQ9Y5P8 575 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 COL4A3Q01955 1670 aa4.77□□□□□ -1.65
CDH1-211ENST00000567320 ITGA10O75578 1167 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 FKBP9O95302 570 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 RBP3P10745 1247 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 POU3F2P20265 443 aaPredicted RBP4.76□□□□□ -1.65
CDH1-211ENST00000567320 LSSP48449 732 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 PHC1P78364 1004 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 TERF2Q15554 542 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 ERCC6LQ2NKX8 1250 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 BROXQ5VW32 411 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 ANKS6Q68DC2 871 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 FKBP9P1Q75LS8 142 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 PDZD4Q76G19 769 aaPredicted RBP4.76□□□□□ -1.65
CDH1-211ENST00000567320 VOPP1Q96AW1 172 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 RNPC3Q96LT9 517 aaKnown RBP4.76□□□□□ -1.65
CDH1-211ENST00000567320 TARS2Q9BW92 718 aaKnown RBP4.76□□□□□ -1.65
CDH1-211ENST00000567320 TEX101Q9BY14 249 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 RSAD1Q9HA92 442 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 MAP3K2Q9Y2U5 619 aa4.76□□□□□ -1.65
CDH1-211ENST00000567320 TMEM200CA6NKL6 621 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 B5MCH6 92 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 DIRC3C9JPN6 131 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 ZNF185O15231 689 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 LPLP06858 475 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 DDX6P26196 483 aaKnown RBP eCLIP4.75□□□□□ -1.65
CDH1-211ENST00000567320 MANFP55145 182 aaKnown RBP4.75□□□□□ -1.65
CDH1-211ENST00000567320 TRIM25Q14258 630 aaKnown RBP4.75□□□□□ -1.65
CDH1-211ENST00000567320 SEPT7Q16181 437 aaKnown RBP4.75□□□□□ -1.65
CDH1-211ENST00000567320 BEAN1Q3B7T3 259 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 PDCD4Q53EL6 469 aaKnown RBP4.75□□□□□ -1.65
CDH1-211ENST00000567320 ABHD15Q6UXT9 468 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 SYT12Q8IV01 421 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 ARHGEF19Q8IW93 802 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 LEO1Q8WVC0 666 aaPredicted RBP4.75□□□□□ -1.65
CDH1-211ENST00000567320 RSAD2Q8WXG1 361 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 DRC1Q96MC2 740 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 WNT8AQ9H1J5 351 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 ADARB2Q9NS39 739 aaKnown RBP4.75□□□□□ -1.65
CDH1-211ENST00000567320 CHST2Q9Y4C5 530 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 TNFRSF18Q9Y5U5 241 aa4.75□□□□□ -1.65
CDH1-211ENST00000567320 SPATA31A6Q5VVP1 1343 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 TBKBP1A7MCY6 615 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 CDC45O75419 566 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 HKR1P10072 659 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 ZSCAN20P17040 1043 aaPredicted RBP4.74□□□□□ -1.65
CDH1-211ENST00000567320 CD38P28907 300 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 PTPN7P35236 360 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 ADCYAP1R1P41586 468 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 IL12RB1P42701 662 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 LGALS4P56470 323 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 MEF2AQ02078 507 aaPredicted RBP4.74□□□□□ -1.65
CDH1-211ENST00000567320 CT83Q5H943 113 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 DRICH1Q6PGQ1 229 aaPredicted RBP4.74□□□□□ -1.65
CDH1-211ENST00000567320 GPRIN1Q7Z2K8 1008 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 ZFP28Q8NHY6 868 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 SNX33Q8WV41 574 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 UBXN4Q92575 508 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 ZNF764Q96H86 408 aaPredicted RBP4.74□□□□□ -1.65
CDH1-211ENST00000567320 KCTD10Q9H3F6 313 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 PIF1Q9H611 641 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 GPRC5DQ9NZD1 345 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 EDARQ9UNE0 448 aa4.74□□□□□ -1.65
CDH1-211ENST00000567320 FAM83GA6ND36 823 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 ITGAMP11215 1152 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 CXCR5P32302 372 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 BMPR1AP36894 532 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 PLA2G5P39877 138 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 RESTQ13127 1097 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 TP53BP2Q13625 1128 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 ATP13A4Q4VNC1 1196 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 C19orf54Q5BKX5 351 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 PITRM1Q5JRX3 1037 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 SYCE2Q6PIF2 218 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 RD3Q7Z3Z2 195 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 SLC5A5Q92911 643 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 FEZ1Q99689 392 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 EMC7Q9NPA0 242 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 TESQ9UGI8 421 aaKnown RBP4.73□□□□□ -1.65
CDH1-211ENST00000567320 TMPRSS11EQ9UL52 423 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 ATP11BQ9Y2G3 1177 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 CDY2AQ9Y6F7 541 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 FPGT-TNNI3KV9GXZ4 949 aa4.73□□□□□ -1.65
CDH1-211ENST00000567320 GASTP01350 101 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 CTSSP25774 331 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 CHN2P52757 468 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 RAP2BP61225 183 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 UGT8Q16880 541 aa4.72□□□□□ -1.65
CDH1-211ENST00000567320 BMT2Q1RMZ1 405 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms